Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0586 ATGGAACCACTGCCGTTTATTTATCTCTCAGTCTTCGCCATTCCAATGGACTTTGTTCTTCGTTTCAACCTTCCAATCGTCATCGTCGTTTTCCAGATTGTATTGATATTGGCATGGTTGGAAGCAAACGATGCGAAGGCGCAAGAACGAAGATTTCAATCGGGAGGATTGGATGGGAGGGTTGAGAAAGTTGCCTCACACTCTTGCATCCATGATCAGATACTTGAACAGAGAAAGCGACCTGGTCGACAGGTGTATTCGGTCACCCCACAAGTTTATGAGCCTGGTAGATCGAAGCCGCTTCAGCATAAAGGTAGGGCGTTACTTGGTGTTTCAACATCATCAAAGCCCTCAAAGGATGAAAAGAAACCTATTAGGATATATCTAAGTTATGATGCTGTTGGTCTCTCCCCTGACAGGGATTGTCAAAATGTTGGTGACATGGTTAAGCTTGGGGACCCTCCGATTACTTCTCTTCCTGGTTTGCCTTCTTGTAATCCTCTTGCTAATCCTCCAACCCTTGGTGATTGTTGGTATAACTGCACTTCTGAAGATATACCAGGAGAGGATAAAAAGCATCGCCTTCGTAAGGCATTAGGTCAGACAGCTGACTGGTTTAGGAGAGCATTGGCTGTTGAGCCTGTCAATGGGAACTTGCGATTGAGTGGATATTCTGCATGTGGACAAGATGGTGGTGTGCAGCTTCCTCGTGAATATGTTGAAGAGGGAGTCTCTGATGCCGACTTAGTTCTTTTGGTTACTACAAGACCTGCTGCAATTTGGACCACACTTGCTTGGGCAGTGGCATGTGAACGAGATCAATGGGGTCGTGCTATAGCTGGACATGTTAATGTCGCTCCTCGTCACTTGACAGCTGAAGAAGAGGCGTCGCTTTCAGCTACTCTGAAACACGAGGTTATCCATGTTCTTGGTTTTGATCCTCATGCCTTTACTCATTTCAGAGATGAAAGGAAAAGACTTCGTAATAAGGTTACTGAACAAGTTATGGATGAAAAGATTGGGCGAGCAGTAACACGTGTGGTGCTACCACGTGTTGTCATGCATTCACGGCATCATTATGCGGCGTTCTCAGGAAATTTTACTGGTTTAGAGCTGGAAGATGGCGGCGAGAGTGGCACATCAGGCTCTCATTGGGAAAAAAGGCTTCTGATGAATGAGATCATGACTGGTTCAGTGGATACAAGATCCGTAGTTTCAAAAATGACACTAGCTCTCTTAGAGGATAGCGGATGGTACAAAGCCAATTATAGCATGGCAGACCGTCTTGATTGGGGACGCAACCAGGGTACTGAGTTTGTTACCTCCCCTTGCAATCTCTGGAAGGGAGCCTATCATTGCAACACGAAAGAGTTTTCAGGCTGTACGTACAACAGAGAGGCACAGGGTTACTGTCCCATTCAAACCTATAGCAGAGACCTTCCTCGGTGGGCTCAATATTTTCCACAAGCTAATAAAGGAGGACCATCTTTATTCGCTGATTATTGCACTTATTTAGTTGCATACACTGATGGTATATGTACAGACACTAACAGTGCACCTGATACAATGCTAGGTGAAGTCCGAGGAAGCAACTCTAGGTGTATGGCCTCATCATTAGTGCGCACAGGATTTGTACAAGGTTTTACGACCCAAGGAAATGGTTGTTATCAGCACAGGTGTATCAACAACACTTTAGAGGTTGCCGTGGATGGTATGTGGAGCATGTGTCCTCAAGCTGGTGGATCCATTCAGTTCCCGGGATTTCATGGTGAATTAATCTGCCCTGCATATCATGAGCTCTGTAACACAGGCATGGTAGTTGACTCGGAGAGATGTCCCAGAGCATGTAACTTCAATGGAGATTGTGTTGATGGAAGGTGCCACTGCTTTCTGGGATTTCATGGTCACGATTGCAGTAGACGTTCCTGCCCCAGCAATTGCACTGGCAATGGCTTATGTCTCAACAATGGAATATGTGAATGTAAAACTGGTTACACTGGCATTGACTGCTCCACTGCTGTTTGTGATGAGCAATGCGGCCTTCATGGTGGGGTTTGTGATAATGGAATTTGCAAATTCCGCTGTTCTGACTATGGGAAATACACTTGCCAGAACAGCTCCACTCTCCTCTCGACTCTTTCGGTTTGCAAAAATGTGCTAGGGAATGATATTTCTGGGCAGCATTGTGCACCCAGAGAACATAGCATGCTGCTTAAGCTAGAAGAAGTGGTTGTCATGCCCAACTACCACCGATTGTTCCCTGGTGGTGCTAGGAAATTCTTCAATATATTTGGCAACACCTTATGTGAAGAGGCAGCTAAACGGCTTTCTTGCTGGATCTCAATCCAGAAGTGTGACGGAGACAACAGATTACGAGTATGTCATTCTGCATGTCAGTCTTATAATCTAGCGTGTGGAGCTTCACTGGACTGCAGTGACCAAACCATTTTCAGCAGCAAGGGCGAGGGTCGGTGTACCGGTTTTGGTGAGAAGCAATCATCATGGTTTAATCGATTTAGAAGCAGTTTTTCTTTGAGAAATAATTACTCAAATGAAATATTAGTTAGAAGCAGGCAGCTTTAA 2583 0.453 MEPLPFIYLSVFAIPMDFVLRFNLPIVIVVFQIVLILAWLEANDAKAQERRFQSGGLDGRVEKVASHSCIHDQILEQRKRPGRQVYSVTPQVYEPGRSKPLQHKGRALLGVSTSSKPSKDEKKPIRIYLSYDAVGLSPDRDCQNVGDMVKLGDPPITSLPGLPSCNPLANPPTLGDCWYNCTSEDIPGEDKKHRLRKALGQTADWFRRALAVEPVNGNLRLSGYSACGQDGGVQLPREYVEEGVSDADLVLLVTTRPAAIWTTLAWAVACERDQWGRAIAGHVNVAPRHLTAEEEASLSATLKHEVIHVLGFDPHAFTHFRDERKRLRNKVTEQVMDEKIGRAVTRVVLPRVVMHSRHHYAAFSGNFTGLELEDGGESGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKANYSMADRLDWGRNQGTEFVTSPCNLWKGAYHCNTKEFSGCTYNREAQGYCPIQTYSRDLPRWAQYFPQANKGGPSLFADYCTYLVAYTDGICTDTNSAPDTMLGEVRGSNSRCMASSLVRTGFVQGFTTQGNGCYQHRCINNTLEVAVDGMWSMCPQAGGSIQFPGFHGELICPAYHELCNTGMVVDSERCPRACNFNGDCVDGRCHCFLGFHGHDCSRRSCPSNCTGNGLCLNNGICECKTGYTGIDCSTAVCDEQCGLHGGVCDNGICKFRCSDYGKYTCQNSSTLLSTLSVCKNVLGNDISGQHCAPREHSMLLKLEEVVVMPNYHRLFPGGARKFFNIFGNTLCEEAAKRLSCWISIQKCDGDNRLRVCHSACQSYNLACGASLDCSDQTIFSSKGEGRCTGFGEKQSSWFNRFRSSFSLRNNYSNEILVRSRQL* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0586 860 Pfam EGF-like domain 643 670 IPR013111 -
Mtr1g0586 860 Gene3D - 118 309 - -
Mtr1g0586 860 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 119 604 - -
Mtr1g0586 860 Gene3D Laminin 610 640 - -
Mtr1g0586 860 Gene3D Laminin 642 673 - -
Mtr1g0586 860 Gene3D Leishmanolysin domain 3 448 506 - -
Mtr1g0586 860 PRINTS Leishmanolysin (M8) metalloprotease family signature 254 283 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Mtr1g0586 860 PRINTS Leishmanolysin (M8) metalloprotease family signature 407 436 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Mtr1g0586 860 ProSitePatterns EGF-like domain signature 2. 659 670 IPR000742 -
Mtr1g0586 860 ProSitePatterns EGF-like domain signature 1. 659 670 IPR000742 -
Mtr1g0586 860 Gene3D Leishmanolysin , domain 2 318 444 - -
Mtr1g0586 860 ProSiteProfiles EGF-like domain profile. 639 671 IPR000742 -
Mtr1g0586 860 PANTHER METALLOENDOPEPTIDASE/ZINC ION-BINDING PROTEIN 23 833 - -
Mtr1g0586 860 Gene3D Leishmanolysin domain 4 507 601 - -
Mtr1g0586 860 Pfam Leishmanolysin 179 603 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Mtr1g0586 860 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 23 833 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Mtr1g0586 860 SMART egf_5 642 671 IPR000742 -
Mtr1g0586 860 SMART egf_5 611 639 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0586 Mtr-Chr1 6737553 6745564 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0586 1 6737553 6745564 Mtr1g0586 1 6737553 6745564 ECH
Mtr1g0586 1 6737553 6745564 Mtr3g4169 3 55593809 55601580 PCT