Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0579 ATGAATCAAGTTGTGTTTAACCTCATTTTATTCACACTAAGCATGCTTCATTCATCGAAAACAAAGGCACAACAGAATTACTCAGGAAATTCAATACTCAGCTGCAAGAACAACGATGATGCGGGACCTTCATCGGCATTCCTTTACACCTGCAATGGCCTCAATAAATCATGCATGACCTATCTAACCTTCAAATCCGTACTACCTTATAACTCCGTTTCCACAATTTCCAGCCTCATTTCATCAAACCCGAACGAGCTAGCCAGAATCAACGGCGCCACTTTGCTCACAGTTTTCCCATCTGGTAAAGATGTTATTGTCCCAGTGAACTGTTCTTGTTTAACCAATGATTATTACAAAGCTGAAACCAAATATATATTGGGTCCAAACCCAACATATTTCATAGTAGCAAACGACACGTTCCAGGGTTTGTCCACATGTGATTCTCTTATGCGTGCGAATCCGTATGGAGAACTTGATTTGCTTCGAGGAATGGAGTTGAATGTGCCACTCCGATGCGCGTGTCCAACATATCATCAGAAAACAAATGGCACCAAGTACTTACTCACATATTCTGTGACCTGGGGTGATAACATTTCAAATATTGCTACAAGATTCAATATACCAGTGGGTAATCTAATTGATGCCAATGGTTTTTCCACACAAACTGAACTCCTTTTTCCATTCACTACTGTTCTGATTCCTTTGGCAAGCGAACCAGTGAGTTTAACAACTATAGTTGCTAATGATCCACCAACCCCTCTTGGTTGCAGCTTCAAAAAGTGCAAGTCAAACACAAAAGTACTCCTCATTGCTTTAACCACCTCACTGCTGGTTCTGTGTGTTTTCTTGTTTGTGCTGTTTCTGATTCGGTTTCTACTCAGAAAGAGATCAGCAAGGTTTGTTAAGCGATGTTTGGAAGTTAACAATAAAAATGGTGTATTTTCAGAAGAGATCCGTGAGGAGATAGCAATCATTGAACATCTCTCCAAAGTGTATAGCTTTGAGGAAATAAAAGAAGCAACTGAGAATTTTAGTTCAAAGAATAGAATCAAAGATTCTTTATTTCGCGGCATATTCAACAATGGCAAGGAAGTGTTGGCTGTTAAAAGAATGAGAGGAGATGCTTCCAAAGAAGTCAATTTGCTGAAAAGGATCAATCATTTCAACCTGATAAAGCTGCAAGGTTACTGTGAAAACGATGCTTGCATCTATCTTGTTTATGAATACATGGAAAATGGGTCTTTAAGGGAATGGCTTTGCAAGGATAATTCAATTGAACACCAAAGTTGGGCAAAGAGGATACAGATTGCTTTGGATATTGCCAATGGACTTCAGTATCTTCACAACTTCACAGAACCTTGCTATGTACACAAGGATATAAACAGTGAAAACATTCTACTAAACAAAGATTTAAGGGCCAAGATAGCAAAATTTGCTCATGCTGAAGAATCAAAAAGGATGATAACTTCTGGTTCTCCCGCATCACATGTTGTAGGATTTATGGGCTATTTGGCTCCTGAGTATGTGGAGGCTCGGATAGTCAGTACAAAAATGGATGTCTATGCCTTTGGAGTGGTGCTGTTGGAATTGATCACCGGCAATGATTCTATTACCCTACAAGATGGAAGAGAAGTGATGCTTTATGAAATCATACAAAACATCATTGGACAAGAGAATGAAGAAGAGAAGGTGAGCTTGTTCATTGATCCTTGCCTCATCGAAAGTTGTAGGAAAGCCTGTGCACTGCAGCTAGTTAAACTGAGTCTAGCCTGCTTGATTCAAGAACCAGATAGCAGACCAAACATTGAAGAGGTGGTCTCTAGCTTATTGAAAATACAGGCAAATGATATGCAACAGAGAATATCACCCAGCATCAATAAGAGTTTAAGCTTGGAGAGGTGA 1905 0.3953 MNQVVFNLILFTLSMLHSSKTKAQQNYSGNSILSCKNNDDAGPSSAFLYTCNGLNKSCMTYLTFKSVLPYNSVSTISSLISSNPNELARINGATLLTVFPSGKDVIVPVNCSCLTNDYYKAETKYILGPNPTYFIVANDTFQGLSTCDSLMRANPYGELDLLRGMELNVPLRCACPTYHQKTNGTKYLLTYSVTWGDNISNIATRFNIPVGNLIDANGFSTQTELLFPFTTVLIPLASEPVSLTTIVANDPPTPLGCSFKKCKSNTKVLLIALTTSLLVLCVFLFVLFLIRFLLRKRSARFVKRCLEVNNKNGVFSEEIREEIAIIEHLSKVYSFEEIKEATENFSSKNRIKDSLFRGIFNNGKEVLAVKRMRGDASKEVNLLKRINHFNLIKLQGYCENDACIYLVYEYMENGSLREWLCKDNSIEHQSWAKRIQIALDIANGLQYLHNFTEPCYVHKDINSENILLNKDLRAKIAKFAHAEESKRMITSGSPASHVVGFMGYLAPEYVEARIVSTKMDVYAFGVVLLELITGNDSITLQDGREVMLYEIIQNIIGQENEEEKVSLFIDPCLIESCRKACALQLVKLSLACLIQEPDSRPNIEEVVSSLLKIQANDMQQRISPSINKSLSLER* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0579 634 Gene3D LysM domain 189 244 IPR036779 -
Mtr1g0579 634 ProSiteProfiles LysM domain profile. 189 234 IPR018392 -
Mtr1g0579 634 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 7 619 - -
Mtr1g0579 634 SMART LysM_2 190 235 IPR018392 -
Mtr1g0579 634 ProSiteProfiles Protein kinase domain profile. 345 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0579 634 SUPERFAMILY LysM domain 189 235 IPR036779 -
Mtr1g0579 634 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE 7 619 - -
Mtr1g0579 634 Pfam LysM domain 191 235 IPR018392 -
Mtr1g0579 634 CDD LysM 190 234 IPR018392 -
Mtr1g0579 634 Gene3D Phosphorylase Kinase; domain 1 305 410 - -
Mtr1g0579 634 Pfam Protein kinase domain 371 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0579 634 Gene3D Transferase(Phosphotransferase) domain 1 411 630 - -
Mtr1g0579 634 SUPERFAMILY Protein kinase-like (PK-like) 335 621 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0579 Mtr-Chr1 6679884 6681788 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mtr1g0579 Pkinase 5.1e-35 CL0016