Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0576 ATGAGAAGGGAACAATCCCAGTCTCCTTGCGTAACGGATGCGGAGCCCGATAGAATTAGTAGTTTACCAGGTCATATAATAGACCAAATTCTCTCAATTTTGCCAATTAAGGAAGCAGTGAGAACAAGTATTTTATCAACCAAATGGAGGTACAAATGGGCCACACTTCCAAATCTTGTGTTTGATAGCCAATGTATCTCCGACACTTCTGAAGACCTTTTAGTTATCAAGAGCAAACTTTCGAGAATTATTGATCATGTACTTTTACTCCATTCTGGGCCAATCAAAAAGTTCAAGCTCTCCCATCGCGAGCTCATTGGAGTGACCGATATTGATCGATGGACTCTTCATCTAACCAGAAGGCCTGTTAAAGAGTTTGTGCTGGAAATCTGGAAAGGGCAACGCTATAAAATACCTTCATGCTTATTTTCTTGTCAAGGTTTACATCATTTAGAATTATTTAACTGTTGGCTTATACCACCATCAACATTTCAAGGATTCAGGAACTTGAAGAGTCTTGATCTGCAACATGTTACCTTGTCTCAAGATGCTTTTGAAAACTTGATATCTACTTGCCCTTTGCTTGAACGATTGACATTGATGAACTTTGATGGTTTCAACTATCTTAATATCCATGCCCCAAATCTCCAGTTTTTTGACATCGGGGGTAAATTTGAGGATATTAGCTTTAAGAACACTTCTCAATTAGCTGTGGTGTCCATTGGTCTCTATGTTAACTTTGAAAGCAGTCAAGGTAGATTGCACGGACGCACTAGCAATCTGGTCGAATTTTTAATTCATTTGCCTCGTATACAAAGGCTGGAGATTCAAAGCTATTTTTTGAAGTATTTGGCTCTGGGGGCTGTACCAGTAAAGCTTCCTACCCCTTGCATTGATCTAAGTTATCTTTCCATACGCATAAACTTCTATGATTCAAAGGAAATTTCAGCTGCTCTTTGCCTTTTCAGAAGCTCACCTAATCTACGAGAACTCGAAATATTGGCACGGCCTGAGGAGCAGCCTCTTCCATTAGCTCACCATGCCGACTGTTGGGAGGATGTCTATTTGGATTGGCCAGTCATGCGAGTGCGACATGTGAGAATAGATGGCATCTCTGGTATCAAACCTGAGTTAGACTTCATCAGCTTTATACTTCTATATTCTCCTGTGCTAGAAAGGATGACTGTGAAACCTGCTTTAAACGCCAGTCCGGAATTGGTGAAAGAACTATTGCGGTTGAGGAGAGCCTCGGGACGAGCTGAAGTTATTTACCTAGACTCTGTATAA 1287 0.4079 MRREQSQSPCVTDAEPDRISSLPGHIIDQILSILPIKEAVRTSILSTKWRYKWATLPNLVFDSQCISDTSEDLLVIKSKLSRIIDHVLLLHSGPIKKFKLSHRELIGVTDIDRWTLHLTRRPVKEFVLEIWKGQRYKIPSCLFSCQGLHHLELFNCWLIPPSTFQGFRNLKSLDLQHVTLSQDAFENLISTCPLLERLTLMNFDGFNYLNIHAPNLQFFDIGGKFEDISFKNTSQLAVVSIGLYVNFESSQGRLHGRTSNLVEFLIHLPRIQRLEIQSYFLKYLALGAVPVKLPTPCIDLSYLSIRINFYDSKEISAALCLFRSSPNLRELEILARPEEQPLPLAHHADCWEDVYLDWPVMRVRHVRIDGISGIKPELDFISFILLYSPVLERMTVKPALNASPELVKELLRLRRASGRAEVIYLDSV* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0576 428 ProSiteProfiles F-box domain profile. 16 50 IPR001810 GO:0005515
Mtr1g0576 428 Pfam Leucine Rich Repeat 169 193 IPR013101 -
Mtr1g0576 428 Gene3D Ribonuclease Inhibitor 115 346 IPR032675 -
Mtr1g0576 428 PANTHER F-BOX/RNI/FBD-LIKE DOMAIN PROTEIN 13 394 - -
Mtr1g0576 428 SUPERFAMILY F-box domain 16 63 IPR036047 GO:0005515
Mtr1g0576 428 SUPERFAMILY RNI-like 136 333 - -
Mtr1g0576 428 PANTHER F-BOX PROTEIN-LIKE 13 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0576 Mtr-Chr1 6656453 6660510 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0576 1 6656453 6660510 Mtr1g0576 1 6656453 6660510 ECH