Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0572 ATGTTCCATAGCAACACTCTACCGATCTCAATCTCCGACGACGAAACCGATGAACTAGGTCGAATGCGCGTTCGTGCTCGCCGTAAACGGAAGAAACTCGGTAACAAACGTTTCTTCAAGAAGCTTCTTGTTAAATACTGGATGTTACTCATCATTATTCCAGCTGCGTTTTTACTCTTTTACGAAATTACACGAATTGGTTTAAGACCTGGTAGTTCTAGTTCTTCTTCCAACAATGCTTCAACAACGAGGAATCAAGATCATGATGATCGATCTAAAGATACCATTGTTAAAACTAACTTGAATCGTCTTGATCCTACTACTCATGTTGTTGCTGGTGTTAGAGAACGTTGTTTGAAGCTTCTACCACCTGAAAAACTTGAGCAACTAGAGATTACCGTGGAAGAAGAATCTAGTTTACCTATTGGTAAAGTCTTGTATATGTCAGCGACTGATGCGTCTTTAATAGGAGGGAATGCTACATTGTCTCAATTGCGTGCAGAGGATACGAGTTTTAATTTATTTACTGGAAATCAAACATTTGAGGAAAGAGATAGAAGTTTTGAGGTGAAAGAAACTACGACGGCACATTGTGGGTTCTACAGTGCGAATGGTGGGTTTAGAATATCAGATAAAGATAAAAGTTTCATGCAAGGTTGCAAAGTGGTGGTATCTACTTGTGCATTTGGTGGCGGAGATGATCTCTATCAACCGATTGGAATGTCAGAGGCTTCACTTAAGAAGGTTTGCTATGTAGCATTCTGGGATGAAATCACACTAAAAGCGCAGGAATTAGTGGGTCGCAGAGTTGGGGATAATGGATTTGTTGGAAAGTGGCGTGTTATTGTCGTTCAGGATCTTCCTTTTTCTGATCAAAGGTTGAATGGTAAAATTCCCAAGATGTTAAGCCATCGCCTTTTCCCTCAAGCAAAATACTCTATTTGGGTAGACTCCAAGTCCCAATTTAGGAGGGACCCACTGGGTGTGTTGGAAGCACTCCTTTGGCGCACAAGTTCTGTACTTGCCATATCAGAACATGGAGCTCGTAGTAGTGTCTATGATGAGGCTAAGGCTGTTGTCAAGAAAAACAAAGCGAAGCCAGAGGAAGTTGAAGTGCAACTGAATCAATACAGAAAAGATGGCATGCCTGTAGACAAGAGATTTAATGGAAAGAAAGCTCTATGTGAAGCCTCTGTTATCGTGAGGAAGCATACACCACTAACTAATCTATTGATGTGCGTCTGGTTTAATGAGGTGGTTCGCTTCACGTCTAGGGATCAGCTCAGCTTCCCATATGTTCTCTGGCGGTTGAAAGCATTTAAAAATATTAACATGTTCCCTGTCTGCACTCGCAAGGATCTGGTCAATAGCATGGGACACATCCGCAAAGCAAAACCATTGCAAAACTGA 1410 0.4156 MFHSNTLPISISDDETDELGRMRVRARRKRKKLGNKRFFKKLLVKYWMLLIIIPAAFLLFYEITRIGLRPGSSSSSSNNASTTRNQDHDDRSKDTIVKTNLNRLDPTTHVVAGVRERCLKLLPPEKLEQLEITVEEESSLPIGKVLYMSATDASLIGGNATLSQLRAEDTSFNLFTGNQTFEERDRSFEVKETTTAHCGFYSANGGFRISDKDKSFMQGCKVVVSTCAFGGGDDLYQPIGMSEASLKKVCYVAFWDEITLKAQELVGRRVGDNGFVGKWRVIVVQDLPFSDQRLNGKIPKMLSHRLFPQAKYSIWVDSKSQFRRDPLGVLEALLWRTSSVLAISEHGARSSVYDEAKAVVKKNKAKPEEVEVQLNQYRKDGMPVDKRFNGKKALCEASVIVRKHTPLTNLLMCVWFNEVVRFTSRDQLSFPYVLWRLKAFKNINMFPVCTRKDLVNSMGHIRKAKPLQN* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0572 469 PANTHER ALKALINE CERAMIDASE-RELATED 4 467 IPR006852 -
Mtr1g0572 469 Pfam Protein of unknown function (DUF616) 167 460 IPR006852 -
Mtr1g0572 469 MobiDBLite consensus disorder prediction 70 93 - -
Mtr1g0572 469 PANTHER OS01G0749100 PROTEIN 4 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0572 Mtr-Chr1 6628526 6632271 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0572 1 6628526 6632271 Mtr1g0572 1 6628526 6632271 ECH