Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0571 ATGGCGAAATCTACCGGCGACGATGTTGAACTCCGGCGAGCTTGCGAATCTGCAATTGAAGATCCTAAGCAGAAGATCATCTTATCAATCCGTGTTGCCAAAAGTCACGGCATCTTAGGAAAATCTTCCAAGCTTTCTAGTCGTCATATGGCTAAACCTAGGGTTCTTGCTCTCTCTACATTAACAAAGGGACAAACGACTACTGCTTTTCTTCGAGTTTTGAAGTATTCTACGGGAGGAGTTCTTGAACCTGCAAAACTATACAAGCTAAGGCATCTTTCAAAAGTAGAAGTTTTAACAAACGATCCTAGTGGATGTACATTTACACTGGGATTTGATAACCTTAGAAGCCAAAGTGTGGCTCCTCCGCAATGGACGATGCGAAATATTGATGACAGGAATCGTCTCCTTCTTTGCATCTTGACCATCTCTAAAGATGTTTTGGGTCGCCTTCCTAAGGTCGTTGGTATAGATGTTGTGGAGTTGGCTCTTTGGGCTAAGGAAAATAGAGCCCCTGTTTCAACTCAGAGTAATGTGAAAGATGGTGGTCCTGTTGCTTCCGCTATGACTGAGAGAGAGTTGAAAGTCAATGTTGAAAAAGACCTTGTCTCCCAGGCAGAGGAAGAGGACATGGAGGCTCTTTTGGGAACGTATGTCATGGGTGTTGGTGAAGCAGAAGAATTTTCTGAAAGACTGAAGAGAGAGCTCCAGGCTCTGGAAGCAGCAAATGTGCATGCCATTTTAGAAAGCGAGCCTTTGATAAATGAGGTGTTGTATGGGCTTGAAGCAGCAACAAATGTTGTAGACGATATGGATGAATGGTTAGGCACATTCAATGTTAAACTCCGCCACATGAGAGAGGATATAGCATCGATAGAAACCCGTAATAACAGCTTGCAAATGCAATCGGTAAATAACAAATCTCTCATCGAGGAGCTTGATAAGCTTCTTGAGCGGTTGCGTGTACCTTCTGAGTTTGCAACGTGTTTGACAGGAGGTTCATTTGATGAAGAACGCATGCTTCAAAATGTAGAAGCATGTGAATGGTTGACTAGTGCCTTGCGCGGTCTTGAAGTGCCCAACATTGACCCCACTTATGCAATTATGAGAGCTGTTAAAGAGAAGCGTGCAGAACTTGAAAAATTAAAATCTACTTTTGTCAGGAGAGCTTCTGAATTCTTGAGAAATTACTTTGCTAGTTTGGTGGACTTCATGATAAGTGATAAAAGTTACTTTTCTCAGCGGGGACAGTTGAAGAGACCTGACCATGCTGACCTGCGGTACAAGTGCAGGACATATGCACGTCTTCTTCAGCATTTGAAGAGCCTTGACAAGAATTGCTTGGGTCCACTGAGAAAAGCTTATTGCAGTTCTCTAAACTTGCTTCTTCGCCGGGAGGCCCGTGAGTTTGCCAACGAACTCCGTGCTAGTACAAAAGCATCTAGAAATCCAACTGTTTGGCTTGAAGGCTCAACTGGTTCTGGTCAGAATGTAAATGCTACCGATACTTCTACAGTATCTGATGCTTATGCAAAGATGCTCACAATTTTTATCCCACTTCTGGTGGATGAGAGTTCGTTTTTTGCACACTTCATGTGCTTTGAAGTTCCTACACTTGTTCCTCCAGGTGGTGTTGTTAACGGCAACAAAGCTGGTTACGATGATGATGATGATTTGGGAATTATGGACATCGATGAGAATGACAGTAAATCTGGAAAAAATTCTGCTGAGCTTGCAGCTTTAAATGAATCACTTCAGGATTTACTGGACGGAATTCAAGAAGACTTTTATGCTGTCGTGGATTGGGCATACAAGATTGATCCTTTACGCTGCATATCAATGCATGGAATAACAGAACGATATCTTTCTGGTCAGAAAGCTGATGCAGCAGGATTTGTACGTCTTTTGCTTGGCGACCTAGAGTCTCGGATTTCTATGCAGTTCAGCCGTTTTGTTGATGAAGCTTGCCATCAAATTGAAAGAAATGAACGGAATGTTCGCCAAATGGGTGTTCTATCCTACATTCCCAGATTTGCAATCCTTGCAACTCGTATGGAGCAGTACATTCAGGGACAGTCTAGGGATTTGGTTGACCAAGCATATACAAAATTTGTTAGCGTAATGTTTACAACCTTGGAAAAAATATCACAAACAGATCCAAAGTATGCAGATATTTTTCTCTTTGAGAACTATGCTGCTTTTCAGAATAGTTTGTATGACCTTGCCAACATTGTGCCCACATTGGCCAAGTTTTATCATCAGGCCAGTGAAGCCTATGAACAAGCTTGCACGCGCCATATTAGCATGATCATATACGTTCAATTTGAACGTCTTTTCCAGTTTGCTCGAAGGATTGAGGATTTGATGTTCACCGTTGCACCTGAAGAGATACCTTTCCAGCTTGGGTTGTCAAAAATGGATCTTCGAAAAATGTTAAAAACCAGCTTATCTGGGGTTGACAAGTCCATTAATGCGATGTATAAGAAACTACAGAAGAATTTGACTTCAGAAGAACTGTTACCTTCCTTATGGGACAAATGCAAGAAAGAGTTTCTCGACAAGTACGAAGGTTTTGCTCAACTTGTGGCTAAGATTTACCCTAATGAGACATTCACATCTGTTGCAGAGATGAAAGGCATTTTAGCTAATATGTAA 2655 0.4192 MAKSTGDDVELRRACESAIEDPKQKIILSIRVAKSHGILGKSSKLSSRHMAKPRVLALSTLTKGQTTTAFLRVLKYSTGGVLEPAKLYKLRHLSKVEVLTNDPSGCTFTLGFDNLRSQSVAPPQWTMRNIDDRNRLLLCILTISKDVLGRLPKVVGIDVVELALWAKENRAPVSTQSNVKDGGPVASAMTERELKVNVEKDLVSQAEEEDMEALLGTYVMGVGEAEEFSERLKRELQALEAANVHAILESEPLINEVLYGLEAATNVVDDMDEWLGTFNVKLRHMREDIASIETRNNSLQMQSVNNKSLIEELDKLLERLRVPSEFATCLTGGSFDEERMLQNVEACEWLTSALRGLEVPNIDPTYAIMRAVKEKRAELEKLKSTFVRRASEFLRNYFASLVDFMISDKSYFSQRGQLKRPDHADLRYKCRTYARLLQHLKSLDKNCLGPLRKAYCSSLNLLLRREAREFANELRASTKASRNPTVWLEGSTGSGQNVNATDTSTVSDAYAKMLTIFIPLLVDESSFFAHFMCFEVPTLVPPGGVVNGNKAGYDDDDDLGIMDIDENDSKSGKNSAELAALNESLQDLLDGIQEDFYAVVDWAYKIDPLRCISMHGITERYLSGQKADAAGFVRLLLGDLESRISMQFSRFVDEACHQIERNERNVRQMGVLSYIPRFAILATRMEQYIQGQSRDLVDQAYTKFVSVMFTTLEKISQTDPKYADIFLFENYAAFQNSLYDLANIVPTLAKFYHQASEAYEQACTRHISMIIYVQFERLFQFARRIEDLMFTVAPEEIPFQLGLSKMDLRKMLKTSLSGVDKSINAMYKKLQKNLTSEELLPSLWDKCKKEFLDKYEGFAQLVAKIYPNETFTSVAEMKGILANM* 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0571 884 SMART Sec3_PIP2_bind_2 49 147 IPR028258 -
Mtr1g0571 884 Coils Coil 282 319 - -
Mtr1g0571 884 Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH 50 145 IPR028258 -
Mtr1g0571 884 PANTHER SEC3/SYNTAXIN-RELATED 1 884 - -
Mtr1g0571 884 PANTHER EXOCYST COMPLEX COMPONENT SEC3B 1 884 - -
Mtr1g0571 884 Pfam Exocyst complex component Sec3 579 868 IPR019160 GO:0000145|GO:0006887
Mtr1g0571 884 Pfam Exocyst complex component Sec3 225 486 IPR019160 GO:0000145|GO:0006887
Mtr1g0571 884 Coils Coil 222 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0571 Mtr-Chr1 6600627 6615051 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0571 1 6600627 6615051 Mtr1g0571 1 6600627 6615051 ECH
Mtr1g0571 1 6600627 6615051 Mtr3g4165 3 55550753 55568056 PCT