Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0562 ATGCTAAGAGATGAAATCATTGGTTCCAAAAGCGCAAGGCACAGCACCACCGCCGCTGTATCTTCGAATAAGGTTCTCGTGGCGGTTAAAGCGGAGAAGGTGATCTCAAACACCGCATTAGCATGGGCGCTTACTAACATCGTTCATTCAAGCGACTCAATCACTCTTCTCGCTGTTTATTCTACTGAAAAAACTGGGAGAAGATTCTGGAATTTTTCGAGAATTGGTGGAGATTGTTCGAATTTGAAGAAACTCGCCGACGCGGGAAAGTCGCCGGAGGAGATTTCTGATATCTCTGAGTCTTGCGCTCAGATGATTTTTCAGTTGCATAATCATGTTGAGGTTAGGGTGAAGATTAAGGTTGTCACAGGAACTCCCAGTGGTGCGGTGGCAGCTGAAGCTAGATGGAGTGGTTCCCATTGGGTCATACTGGACAAGAAATTAAAGCAAGAGATAAAACATTGCATGGATGAACTCGGCTGTAGCATTGTGGTGATGAATGGCTCACAGCCTAAAGTCCTCAGACTTAATTTAGGAGGACATTCCAATGAACTTCAAACTCCATTTTTCTCTGCTCCCTCTTCACCAGGTATAGAAATTGGAAAGTTAAAAGGCCGCAGATTGAAGCATTCCACCCCAGTTGGTAGCCCTGAAGAAACAGGTTCTTCTGTTACAAGAAGTATTGGAGTAGATTCAGTGTCAAGTTCAGACTCAATGACTTCTCCTTTCCTGGTCTATAAAGAAAACCCTCTGTATGAGGGTCACGGATCACAAAAAAGAACAAACAAACCAACCAACGAGCCAAAGAATTTCAACTTCAAGCCACCTTTGTACTGTAATTTGGAAAGGGATAGCCCTCCCCCTTCAAGGAAACTCCCAACATCGTCTCTGGCTAGTGATAAGAACACTGAATTTTGGATCCATCAGAACCACATTAATAATGAGAAGCTTCAAAGGGCTGAAAATAAACCTATTCAAAGAACAAAATCTCCAAATTCTAAAACTTTACTTGAGAATTTCTTACACTGTGATCAAGAGAAGAGAACAAATGAACTCGAGTTTAACAAAGCTGAAAGTAGAAGTTATGTCACTAGCTCAAGCATCAGAGAAAGTCCTATTCCTTTGGGTAGAAATTCCTCTGTACCTCCCCCCTTGTGCTCTCAGTGTCAGAATATAGCACCTGTATTTGGAAATCCTCCTAGACGGTTTTCTTATAGAGAGATAGCAGAAGCTACTGACATGTTCTCAGATTTGAATTTTTTGGCTGAAGGTGGATTTGGTGTGGTTCACAAAGGAATACTCAAAGATGGCCAAGTTGTTGCAGTGAAACAATTAAAATTTAGTGGCTCTCAAGCAGATCTTGATTTCTGCAGGGAAGTTCGGCTTTTGAGTTGCGCACAACACAGAAATGTTGTATTGCTAATAGGATTTTGCACAGAGGAAAGTGTGAGGATATTAGTCTATGAGTATATATGTAATGGGACGTTAGACCTCTGCTTACATGGCAGAGATAGTATAACCTTGGATTGGAACTCGCGGTTAAAGATAGCAATTGGAGTTGCACGAGGCTTACGTTACCTCCATGAAGATTGTAGAGTTGGTTGTATAGTGCACAGAGATATTAGACCCAAAAATATCCTCTTAACCCATGACTTTGAACCTCTGGTGGCTGATTTTGGCCTTGCTAGATGGCAATCAGAATGGAATATAAATACAGAAGATCGAGTTATGGGAACTTCAGGGTACATTGCACCGGAGTATCTTGATGCTGGAATTCTTACGTGTAAAGTAGATGTATATGCATTTGGAATTGTTTTATTAGAGTTAATGACAGGTCGAAAAATTAGTGAGTTGGAACAGTTCAATGGACATTCATATCTTTCTGAATGGTTTCACCCCCTACACATGTTGGATCCCAATCACATCTTACAAAACGTTGGATCTCTCAACCCATGGTTGGATTCTGAAGGGTCACTAGAATTTAATCTTCAATTGAAAGCCATGGCACAAGCTGCTTCACTGTGCCTGTGTTTGGACCCCGACTCCAGACCCCCAATATCAAAGATCCTCAGAGTGCTGGAAGGGGGCAATCCAGTTCGTTCTTTGGGTTTAGACATCAATTCAGTTGGTAACATAAGTGGTCATTTAAGTGGTTTGAGTTCGCATACTCCTCCTAAAGGTACAATAAGCCATTCTCGCATGTTATCACATTGA 2214 0.4169 MLRDEIIGSKSARHSTTAAVSSNKVLVAVKAEKVISNTALAWALTNIVHSSDSITLLAVYSTEKTGRRFWNFSRIGGDCSNLKKLADAGKSPEEISDISESCAQMIFQLHNHVEVRVKIKVVTGTPSGAVAAEARWSGSHWVILDKKLKQEIKHCMDELGCSIVVMNGSQPKVLRLNLGGHSNELQTPFFSAPSSPGIEIGKLKGRRLKHSTPVGSPEETGSSVTRSIGVDSVSSSDSMTSPFLVYKENPLYEGHGSQKRTNKPTNEPKNFNFKPPLYCNLERDSPPPSRKLPTSSLASDKNTEFWIHQNHINNEKLQRAENKPIQRTKSPNSKTLLENFLHCDQEKRTNELEFNKAESRSYVTSSSIRESPIPLGRNSSVPPPLCSQCQNIAPVFGNPPRRFSYREIAEATDMFSDLNFLAEGGFGVVHKGILKDGQVVAVKQLKFSGSQADLDFCREVRLLSCAQHRNVVLLIGFCTEESVRILVYEYICNGTLDLCLHGRDSITLDWNSRLKIAIGVARGLRYLHEDCRVGCIVHRDIRPKNILLTHDFEPLVADFGLARWQSEWNINTEDRVMGTSGYIAPEYLDAGILTCKVDVYAFGIVLLELMTGRKISELEQFNGHSYLSEWFHPLHMLDPNHILQNVGSLNPWLDSEGSLEFNLQLKAMAQAASLCLCLDPDSRPPISKILRVLEGGNPVRSLGLDINSVGNISGHLSGLSSHTPPKGTISHSRMLSH* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0562 737 Gene3D Phosphorylase Kinase; domain 1 389 490 - -
Mtr1g0562 737 Gene3D Transferase(Phosphotransferase) domain 1 491 700 - -
Mtr1g0562 737 MobiDBLite consensus disorder prediction 215 239 - -
Mtr1g0562 737 PANTHER OS01G0253100 PROTEIN 19 728 IPR045271 GO:0004714|GO:0006468
Mtr1g0562 737 SMART tyrkin_6 415 693 IPR020635 GO:0004713|GO:0006468
Mtr1g0562 737 MobiDBLite consensus disorder prediction 717 737 - -
Mtr1g0562 737 Pfam Protein kinase domain 418 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0562 737 ProSitePatterns Tyrosine protein kinases specific active-site signature. 536 548 IPR008266 GO:0004672|GO:0006468
Mtr1g0562 737 MobiDBLite consensus disorder prediction 253 273 - -
Mtr1g0562 737 ProSiteProfiles Protein kinase domain profile. 415 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0562 737 MobiDBLite consensus disorder prediction 255 269 - -
Mtr1g0562 737 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 19 728 - -
Mtr1g0562 737 SUPERFAMILY Protein kinase-like (PK-like) 395 693 IPR011009 -
Mtr1g0562 737 MobiDBLite consensus disorder prediction 206 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0562 Mtr-Chr1 6533182 6539542 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Mtr1g0562 Pkinase 1.3e-40 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0562 1 6533182 6539542 Mtr1g0562 1 6533182 6539542 ECH