Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0561 ATGCATACTTTATTTTCACCTTTGTTAGAACCAGACCTATCTTTAAACATAAGTCTTCCTTCTAATATTTCTGATTCTGAACCCAAAGGAATAACAAATATATGTTCAATATCAACTACTTCTGATTCAGCTAGTAGTGGAAGTGAATTAAGCCATGAAAATCCATTTATCTATCCTCATCAACGTGACCCAACATTGAGATTAGGCTTTGGAAATTCAGATTTGATGAATCCACATCATCATAATCATCACCTTCATCGTCATCAAGTTCAAGGGGTTTCAAGAAACTTTAACCAACACTTCCAACCTCACATCTATGGCCGCGATTTCAAGCGAAATACAAGAGTCGTTAATGGTGTTAAAAGAAGTGTTAGAGCTCCAAGAATGAGATGGACTACAACCCTTCATTCCCATTTTGTTCATGCTGTTCAACTACTTGGTGGTCATGAAAGAGCAACACCAAAATCTGTGTTAGAGTTAATGAATGTGAAGGATCTAACCCTAGCACACGTCAAGAGTCACTTACAGATGTATAGAACAGTGAAGACCACTGACAAATCAGGAGCAGGTCATGGGATACTGCAGACACAAGGGATTAATATTGTTCCTTTGCATGGAGCTAATTCTTCAGCTGATGAGAGACCAAATTTACCTCAACCACTTCAAAATTCACTTAGGACATCTTGGCAACCATCAATAGAGACAAATACAAACAATACTGAAGAAAAATCCGAAATTGGTTTGACGTATTCTCAATTGAAGGAAAATGATACCATGGTGAAGAGGTTGGATTCTGCCCAATTGATTGACTTAGAATTCACACTTGGAAGGCCTAATTGGGGAAAAGACCATGCTGAATCATCAAGAGAATTATCTCTTCTTAAGTGTTAA 891 0.3749 MHTLFSPLLEPDLSLNISLPSNISDSEPKGITNICSISTTSDSASSGSELSHENPFIYPHQRDPTLRLGFGNSDLMNPHHHNHHLHRHQVQGVSRNFNQHFQPHIYGRDFKRNTRVVNGVKRSVRAPRMRWTTTLHSHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKTTDKSGAGHGILQTQGINIVPLHGANSSADERPNLPQPLQNSLRTSWQPSIETNTNNTEEKSEIGLTYSQLKENDTMVKRLDSAQLIDLEFTLGRPNWGKDHAESSRELSLLKC* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0561 296 SUPERFAMILY Homeodomain-like 124 180 IPR009057 -
Mtr1g0561 296 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 127 180 IPR006447 GO:0003677
Mtr1g0561 296 Pfam Myb-like DNA-binding domain 128 179 IPR001005 -
Mtr1g0561 296 Gene3D - 126 183 - -
Mtr1g0561 296 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 2 296 - -
Mtr1g0561 296 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 2 296 IPR044847 GO:0000976|GO:0006355|GO:0010158
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0561 Mtr-Chr1 6511145 6514854 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mtr1g0561 Myb_DNA-binding 1.4e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0561 1 6511145 6514854 Mtr1g0561 1 6511145 6514854 ECH