Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0544 ATGGGCCATGACTCAGATAACCACCAAGCACCACCGTCAGTTCAGGCACCGCCACCGGGACCACCACCTCAGAACCTTGGACTTTCAAGGGGTCCCACTTGGACTCCAGCTGAACAGCTTCTTCAGCTTCATTATTGCATCCATTCAAATCCTTCATGGCCTGAAGCATTGCTTTTGGCTTTTCAGCACTACATTGTGATGCTTGGAACAACTGTTATGATTGCAAGTTACCTTGTACCTCAAATGGGTGGGAGTCATCGTGATAAGGCTTGTGTGATTCAGACATTGTTGTTTATGTCTGGTATCAACACATTGCTTCAGACTTGGTTTGGTTCAAGGCTTCCGGTGATTATGGGTGGATCACTTGCTTTCTATCTACCGGTGATGTCGATCATAAATGATTACAATGACCAAACTTTTCCATCTGAGAATCAGAGGTTTCGCTACACAATTAGAACAATTCAAGGATCTCTCATTGTTTCTTCTTTTGTCAATATCTTCCTTGGATATAGTAGGACATGGGGAAATTTAACAAAGTTTTTTAGTCCCATTAGCATTGTACCTGTGGTTTGTGTGGTCGGACTCGGACTGTTCGGGAGGGGCTTTCCGATGCTTGCAGATTGTGTGCAGATTGGACTACCTATGCTCCTTCTACTGATCATAACACAACAGTATTTGAAGCACCTTCATGCTAAGGCTCATCATATACTTGAGAGGTTTGCTTTACTTATCTGCATTGCCATTATTTGGGCTTTTGCCGCTATCCTTACCGTTGCTGGTGCATACAATACTTCCAAAGAAAAGACTCAAACAAGTTGTCGCACAGATCGTTCGTACCTTCTGACCCGTGCTCCATGGATTTATGTTCCATACCCATTTCAGTGGGGTACCCCCATATTCAAAGCTAGTCATGTCTTTGGGATGATGGGAGCAGCACTTGTCACTTCTTTTGAGTCAACCGGTACTTTCTTCGCCGCAGCCAGGCTTTCTGGTGCAACACCCCCTCCTGCACATGTGCTCAGCCGAAGCATCGGGCTTCAGGGCATTAGCATGCTTATTGAAGGCATTTGTGGTTCTGTTGTTGGTACTACAGCATCTGTTGAAAATGTCGGTCTACTCGGTCTCACACACATAGGGAGCAGAAGAGTGGTGCAAATGTCATGTGGTTTCATGATTTTATGCTCCATTTTTGGTAAATTTGGAGCCTTTTTCGCATCAATTCCCCTCCCAATATTCGCTGCTATATACTGTGTTTTATTCGGCATTGTCGCTGCTACTGGGATCTCATTTATACAATTTGCAAATAACAATTCCATAAGGAATATCTATGTTTTCGGCTTAACCTTGTTTCTCGGGATTTCAATTCCTCAATATTTTGTCATGAACACTGCACCTGATGGTCATGGTCCAGTTAGAACAAATGGTGGATGGTTTAATGACATATTGAACACCATATTCTCATCTCCACCAACTGTGGCAATAATAGTTGGGACAGTTCTTGACAACACACTTGAAGCTAAACAAACAGCCGTGGACAGAGGACTTCCATGGTGGGTTCCTTTCCAGAAAAGGAAGGGAGATGTTAGAAATGATGAATTTTATCGCTTTCCTCTCCGTTTGACTGAATATATTCCTAGTAGATTTCTCTAG 1650 0.4339 MGHDSDNHQAPPSVQAPPPGPPPQNLGLSRGPTWTPAEQLLQLHYCIHSNPSWPEALLLAFQHYIVMLGTTVMIASYLVPQMGGSHRDKACVIQTLLFMSGINTLLQTWFGSRLPVIMGGSLAFYLPVMSIINDYNDQTFPSENQRFRYTIRTIQGSLIVSSFVNIFLGYSRTWGNLTKFFSPISIVPVVCVVGLGLFGRGFPMLADCVQIGLPMLLLLIITQQYLKHLHAKAHHILERFALLICIAIIWAFAAILTVAGAYNTSKEKTQTSCRTDRSYLLTRAPWIYVPYPFQWGTPIFKASHVFGMMGAALVTSFESTGTFFAAARLSGATPPPAHVLSRSIGLQGISMLIEGICGSVVGTTASVENVGLLGLTHIGSRRVVQMSCGFMILCSIFGKFGAFFASIPLPIFAAIYCVLFGIVAATGISFIQFANNNSIRNIYVFGLTLFLGISIPQYFVMNTAPDGHGPVRTNGGWFNDILNTIFSSPPTVAIIVGTVLDNTLEAKQTAVDRGLPWWVPFQKRKGDVRNDEFYRFPLRLTEYIPSRFL* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0544 549 Pfam Permease family 56 459 IPR006043 GO:0016020|GO:0022857|GO:0055085
Mtr1g0544 549 MobiDBLite consensus disorder prediction 1 31 - -
Mtr1g0544 549 MobiDBLite consensus disorder prediction 12 26 - -
Mtr1g0544 549 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 6 547 - -
Mtr1g0544 549 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER 3 6 547 IPR029943 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0544 Mtr-Chr1 6334346 6339009 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0544 1 6334346 6339009 Mtr1g0544 1 6334346 6339009 ECH