Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0543 ATGGCCTTAACGGACTTTTTTTCCTTAACAAATGAAGATTTATGGAAAATGCTTGCAGCAATTTCACGCAAAACATTCAACTCTAGATCAAGCGCTGAACAGCTCTTAACCTTCATCCGCGAAATTCTTCCAACAATTGAACAAATCAAATACTCCGGCGTCGAACTTCCACCGCCGAGACAATCTCATCTTGATCGTCTCTCCGAGATTCTCCGCTCCGGCGTTGAGCTTTCTCATCAAGTCCTCGCCACTAGTCGCTGGAACGTTTATCGTAACTTTCAGCTTGCGAAGAAGATGGAGAATCTTGAAGAGACTGTCACACAAATCTTGCAGGTTCCGATGCAAGCTTATATACTTGCTGATATCAACCATGTAAGAGCCGAGATGACGGAGCGGTTTGACCGGATTGAGGAGTCGAACCGGAGGATGGAGCGGTTTTTTGGAGGGATGAAGATTGGCGTTGGTGGTGTTGGGTGGGTTGAGGGAGCTGTGAGGTCTAGTGAGGAAGATGAGGGTAGTTTGGGGAATTTGGATTTGAGTTTTGGTTTGGAGTTTGGGAAGAATAAGGTTATGGAAATGGTTGTTGGAAGGAAAGATTTTTGTCTTGTTGGAATTTCTGGGATTGGTGGATCTGGGAAAACTACTCTTGCCAGAGAGATTTGTAGAGATGAACAAGTGAGAGGCTATTTCAAAGAAAGGATTTTGTTTTTGACTGTCTCGCAGTCTCCGAATGTGGAGCAGCTGAGGGCAAAGATTTGGGGACACATAATGGGAAATGGAAGTTTCAATACCAATTATGTTGTTCCTCAATGGAAGCTGCAATATGAATGCAGCGGGAGCCAACCTCAAATCCTTGTTATTCTGGATGATGTGTGGTCACCTTCTGTGCTGGAGCAGCTTGTGTTTAGAATGCCTAATTGCAAGTTCATTGTGGTTTCCAGGTTCATATTCCCCATTTTTAATGCAACTTATAAAGTTGAATTGTTGGACAAAGATGATGCACTGTCTTTGTTCTGTCACCACGCTTTCGGACAGAAATCAATTCCTTTCGCAGCTAATCAGAATTTAGTCAAACAGGTTGTGGCTGAATGTGGAAATCTTCCACTAGCTCTTAAAGTGATTGGCGCTTCGTTGCGAGATCAAAATGAAATGTTTTGGTTAAGTGTTAAAACAAGGCTTTCTCAAGGGTTAAGTATAGATGAATCCTATGAACGTAATCTGATTGATAGAATGGCAATCAGTACTAATTACTTACCCGAAAAGATCAAGGAGTGTTTCTTGGACCTTTGCTCCTTTCCTGAGGATAAAAAGATTCCTCTAGAAGTTCTAATCAATATGTGGGTTGAAATCCATGATATTCATGAAACAGAAGCATATGCAATTGTGGTTGAGCTTTCAAACAAGAATCTCCTCACCTTAGTGGAAGAGGCACGTGCTGGTGGTATGTATAGCAGTTGCTTTGAGATCTCTGTTACTCAACATGATATATTAAGAGATCTTGCCCTTAATTTGAGCAACCGTGGAAACATTAATCAACGCCGAAGATTAGTTATGCCGAAACGAGAAGATAATGGACAGCTTCCTAAAGAATGGCTGAGATATGCTGACCAACCGTTCGAAGCTCAAATTGTTTCAATTCACACTGGTGAAATGAGAAAAAGTGACTGGTGTAATTTGGAATTTCCTAAGGCTGAAGTACTGATTATTAATTTCACATCCAGTGAATACTTCTTACCTCCCTTCATAAATAGAATGCCAAAATTGAGAGCATTAATGGTAATAAACCACAGCACTTCATATGCTTGTCTTCACAATATATCGGTTTTCAAGAATTTAACCAACTTGAGGAGCCTTTGGTTTGAAAAAGTTTCCATCCCACACTTATCAGGCATAGTCATGGAAAGCTTGAGGAAATTGTTTATAGTCCTTTGTAAGATCAACAACAGTCTTGAAGGAAAAGATTCAAACATCGCCGATATCTTCCCTAACATCTCAGAGCTCACGCTTGATCACTGTGAGGATGTAACCGAGTTACCTTCAAGCATTTGCAGGATACAGTCACTACAAAACTTGAGTCTTACTAACTGTCATAGTTTAACACGATTACCTATTGAATTAGGCTCACTAAGATATCTAGAGATTCTACGGTTATATGCTTGTCCAAATTTGAGAACACTTCCTCCTAGCATCTGTGGAATGACTAGATTGAAGTATATCGACATTTCTCAATGTGTTTACCTTGCAAGCTTCCCTGATGCAATTGGTAAGTTGGTAAATTTAGAGAAAATCGACATGAGGGAATGTCCGATGATTACAAATATACCGAAGTCTGCATTGTCATTGAATTCTTTGCAGCTTGTAATTTGTGATGATGAAGTGTCTTGGATGTGGAAGGAAGTCCAGAAGGTCAAGCTTAATGTTGATATTCAAGTAGTAGAGATTGAATATGATCTAGATTGGCTTAGAGAATAA 2472 0.4021 MALTDFFSLTNEDLWKMLAAISRKTFNSRSSAEQLLTFIREILPTIEQIKYSGVELPPPRQSHLDRLSEILRSGVELSHQVLATSRWNVYRNFQLAKKMENLEETVTQILQVPMQAYILADINHVRAEMTERFDRIEESNRRMERFFGGMKIGVGGVGWVEGAVRSSEEDEGSLGNLDLSFGLEFGKNKVMEMVVGRKDFCLVGISGIGGSGKTTLAREICRDEQVRGYFKERILFLTVSQSPNVEQLRAKIWGHIMGNGSFNTNYVVPQWKLQYECSGSQPQILVILDDVWSPSVLEQLVFRMPNCKFIVVSRFIFPIFNATYKVELLDKDDALSLFCHHAFGQKSIPFAANQNLVKQVVAECGNLPLALKVIGASLRDQNEMFWLSVKTRLSQGLSIDESYERNLIDRMAISTNYLPEKIKECFLDLCSFPEDKKIPLEVLINMWVEIHDIHETEAYAIVVELSNKNLLTLVEEARAGGMYSSCFEISVTQHDILRDLALNLSNRGNINQRRRLVMPKREDNGQLPKEWLRYADQPFEAQIVSIHTGEMRKSDWCNLEFPKAEVLIINFTSSEYFLPPFINRMPKLRALMVINHSTSYACLHNISVFKNLTNLRSLWFEKVSIPHLSGIVMESLRKLFIVLCKINNSLEGKDSNIADIFPNISELTLDHCEDVTELPSSICRIQSLQNLSLTNCHSLTRLPIELGSLRYLEILRLYACPNLRTLPPSICGMTRLKYIDISQCVYLASFPDAIGKLVNLEKIDMRECPMITNIPKSALSLNSLQLVICDDEVSWMWKEVQKVKLNVDIQVVEIEYDLDWLRE* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0543 823 SUPERFAMILY L domain-like 566 787 - -
Mtr1g0543 823 ProSiteProfiles RPW8 domain profile. 1 148 IPR008808 -
Mtr1g0543 823 Gene3D - 181 316 IPR027417 -
Mtr1g0543 823 Pfam NB-ARC domain 188 395 IPR002182 GO:0043531
Mtr1g0543 823 Gene3D - 328 406 IPR042197 -
Mtr1g0543 823 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 14 133 IPR008808 -
Mtr1g0543 823 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 7 820 - -
Mtr1g0543 823 Gene3D Ribonuclease Inhibitor 550 808 IPR032675 -
Mtr1g0543 823 PRINTS Disease resistance protein signature 202 217 - -
Mtr1g0543 823 PRINTS Disease resistance protein signature 278 292 - -
Mtr1g0543 823 PRINTS Disease resistance protein signature 364 378 - -
Mtr1g0543 823 PRINTS Disease resistance protein signature 683 699 - -
Mtr1g0543 823 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 820 IPR044974 GO:0006952
Mtr1g0543 823 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 429 IPR027417 -
Mtr1g0543 823 Gene3D - 409 500 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0543 Mtr-Chr1 6327278 6330756 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0543 1 6327278 6330756 Mtr1g0543 1 6327278 6330756 ECH