Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0542 ATGGCACTGAACGATTTCTTCGCCGGAGAAATTGCCACAGAGCTTATAAAAATGCTCATAAACATATCTAGAAAATCTCTTCTATGCAGAACAAGCGCAGAACAACTCATATCATACATCAATGAACTCCTCCCTACCATACAAGAAATCAAATACTCCGGCAATGAGTTACCGGAGCAAAGACAGTTTCAGCTCGACCGTTTCTCAGAGATTCTCCGTTCAGGGGTCGAGCTTTCTCACAAAGTCTTGGCTTCTAGCAGGTGGAACGTGTACAAGAATTTACAGCTTGCAAAGAAGATGGAGAAGCTTGAAAAGAACGTGTCAAGATTTTTGCATGGTCCCATGCAGGCTCATATATTAGCTGACGTGCACCACACAAGGTATGAGATGGCAGAAGGGTTCGATCGGGTTGATAGGAAGTTGGAGAAGTATTTTGGTGAGATGAAGATTGGCGTGGGAGGTGGAGGGTGGGTGCAGGAAGCTGTGAGGTCTTGTATGGAGGAAGATGAGAATTGGGTTGAGGGTAATTATGGGAATTTGAGTTTGAGTGTTGGTTTGGATTTGGGGAAGAAGAAAGTTAAGGAGATGGTTATGGGAAGAGAGGATTTATGGGTTGTTGGTATTCATGGGATTGGTGGATCTGGGAAAACAACTCTTGTTAAAGAGATTTGTAAAGATGAACAAGTGAGATGCTATTTTAATGAGAAAATCTTGTTTCTTACTGTTTCACAATCTCCAAATGTGGAGCAGCTCAGGTCAAAAATTTGGGGACACATAATGGGAAACAGAAATTTGAATCCAAATTATGTTGTTCCTCGGTGGATACCACAATTTGAATGCAGAAGTGAAGCTAGAACCTTGGTTGTTCTAGATGATGTTTGGTCACAAGCAGTTCTTGAACAGCTTGTGTGTAGAATACCAGGTTGCAAGTTTGTTGTTGTTTCCAGGTTCCAATTCCCAACAATATTCTCTGCAACTTATAAGGTTGAATTGCTCAGTGAAGAGGATGCTCTGTCATTATTCTGTCACCATGCTTTTGGACAGAAATCAATCCCTTTAACAGCTAATGAGAATTTGGTCAAACAGGTTGTGAGTGAGTGTGAAAATCTTCCATTAGCTCTTAAAGTGATTGGAGCTTCATTGAGAGATCAACCTGAAATGTTTTGGGCAAGTGTTAAAAACAGGTTATCTCAAGGCCAAAGTATTGGAGAATCTCATGAAATCAACCTAATTGAAAGAATGGCAATAAGTATCAACTACCTAAAGGAAGATATCAAAGAGTGCTTCTTAGACTTGTGTGCATTCCCTGAGGACAAAAAAATCCCTCTAGATGCTCTCATCAATATGTGGGTTGAAATTCATGACATTGATGAGAAAGATGCTTTTGCTATTGTTGTTGAGCTCTCCAATAAAAATCTTCTCACCTTGGTGAAAGAAGCGCGTGCTGGTGGCATGTACAGCAGTTGCTTTGAGATCTCTGTTACTCAACATGATGTGCTTAGAGACCTTGCAGTTAATTTGAGTAATCGCGAAAGTATTAATGAACGACGACGATTAGTTATGCCAAAACGAGAGAAAGGACTCCCAAAAGAATGGCTGAGAAACAAACATAAACCATTTGAAGCTCAAATTGTTTCGATTCACACAGGTGAAATGAAGGAAAGGGATTGGTGTAAACTTGAATTTCCTAAGGCTGAAGTTCTGATCATAAATTTCACATCTAAGGACTACTTTTTACCTCCTTTCATAGATAAAATGCCAAATTTGAGAGCTCTAATAGTAATAAACTATAGTGCATCATATACATGCCTTCACAATGTTTCAGTTTTCAACAATTTGGCCAACTTGAGAAGCCTGTGGCTTGAAAAAGTTTCCATCCCTCAATTTGGAGGCATTCTCATGGAAAACTTAGGCAAGTTATTTATAGTTTCATGTAAGATTAATAACAATCTAGAGGGTAAAGAGGTAAATCTGTCTCAAATCTTTCCTAACCTCTCTGAGATCACTCTTGATCATTGTGATGATGTAACTTCTTTACCCTCAAGCATTTGTAGGATACAATCACTCCAAAACTTGAGTCTCACCGAATGTCACAATTTGGAACAACTTCCTGTTGAATTAGGCGCGCTAAGATCTCTAGAGATACTCCGGTTATACGCGTGTCCGGTATTAAAAACACTTCCTCCTAGCGTCTGTGACATGACTCGACTGAAGTATATCGATGTTTCACAATGTGTTAACTTTTCATGTTTCCCTGAAGAGATTGGTAAACTAGTTAGCTTGGAAAAGATTGACATGAGGGAATGCTGTATGATTAAGAAAGTACCAAAATCTGCTAGTTCATTGAAGTCTCTTAGGCTTGTAATTTGTGATGAGGAAGTGTTTGGTATGTGGAAAGATGTTGAGAAGGCCAAGCCAAATGTTCATATTCAAGTATCAGAACAGTGTTTTGATTTGGAATGGCTGAGTGAGTGA 2475 0.3935 MALNDFFAGEIATELIKMLINISRKSLLCRTSAEQLISYINELLPTIQEIKYSGNELPEQRQFQLDRFSEILRSGVELSHKVLASSRWNVYKNLQLAKKMEKLEKNVSRFLHGPMQAHILADVHHTRYEMAEGFDRVDRKLEKYFGEMKIGVGGGGWVQEAVRSCMEEDENWVEGNYGNLSLSVGLDLGKKKVKEMVMGREDLWVVGIHGIGGSGKTTLVKEICKDEQVRCYFNEKILFLTVSQSPNVEQLRSKIWGHIMGNRNLNPNYVVPRWIPQFECRSEARTLVVLDDVWSQAVLEQLVCRIPGCKFVVVSRFQFPTIFSATYKVELLSEEDALSLFCHHAFGQKSIPLTANENLVKQVVSECENLPLALKVIGASLRDQPEMFWASVKNRLSQGQSIGESHEINLIERMAISINYLKEDIKECFLDLCAFPEDKKIPLDALINMWVEIHDIDEKDAFAIVVELSNKNLLTLVKEARAGGMYSSCFEISVTQHDVLRDLAVNLSNRESINERRRLVMPKREKGLPKEWLRNKHKPFEAQIVSIHTGEMKERDWCKLEFPKAEVLIINFTSKDYFLPPFIDKMPNLRALIVINYSASYTCLHNVSVFNNLANLRSLWLEKVSIPQFGGILMENLGKLFIVSCKINNNLEGKEVNLSQIFPNLSEITLDHCDDVTSLPSSICRIQSLQNLSLTECHNLEQLPVELGALRSLEILRLYACPVLKTLPPSVCDMTRLKYIDVSQCVNFSCFPEEIGKLVSLEKIDMRECCMIKKVPKSASSLKSLRLVICDEEVFGMWKDVEKAKPNVHIQVSEQCFDLEWLSE* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0542 824 Pfam NB-ARC domain 191 410 IPR002182 GO:0043531
Mtr1g0542 824 SUPERFAMILY L domain-like 568 788 - -
Mtr1g0542 824 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Mtr1g0542 824 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 3 821 - -
Mtr1g0542 824 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 432 IPR027417 -
Mtr1g0542 824 Gene3D - 181 321 IPR027417 -
Mtr1g0542 824 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 821 IPR044974 GO:0006952
Mtr1g0542 824 Gene3D - 331 413 IPR042197 -
Mtr1g0542 824 PRINTS Disease resistance protein signature 205 220 - -
Mtr1g0542 824 PRINTS Disease resistance protein signature 280 294 - -
Mtr1g0542 824 PRINTS Disease resistance protein signature 367 381 - -
Mtr1g0542 824 PRINTS Disease resistance protein signature 684 700 - -
Mtr1g0542 824 Gene3D - 414 503 IPR036388 -
Mtr1g0542 824 Gene3D Ribonuclease Inhibitor 556 806 IPR032675 -
Mtr1g0542 824 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 133 IPR008808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0542 Mtr-Chr1 6318391 6322091 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0542 615 801 Receptor kinase-like Gene Family AT5G27060 29.231 3.98e-09 58.5