Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0535 ATGAGAGGTTTTAATATAGAAAAGACACTCACTCACTACAACATAAAGATGAGTTCAATGTTGTCACAAAAAGTACTTTTGTGGTCATTGATTTTTTTAGTTTGCAAAGCCAACCAACAAAGTGAATACCTCTACAAGTTTATTCAATCAAAGAGGTCTCAACAAAAGCCTTCACATGTAGAATCTTATTCAAGTACTATTGTTGATGAACATGTTTCAAAGGTACATGTTGTTGAACAACAATTAAGGTTGATGGAAGATGATAAGGTGAAGGCTTTGCCTGGACAACCAAAAGGGGTGGATTTTGATCAATATGCTGGCTATGTAACTGTTGATTCAAAAGGAGGGAGAGAACTTTTCTACTACTTTGTAGAATCATCTCTAAATTCTTCCACAAAGCCTCTTATTCTATGGTTAAATGGAGGACCTGGATGCTCTTCATTTGGGTATGGAGCCATGCAAGAATTAGGACCTTTTAGAGTCAATAGTGATGGAACCACACTTTCCCTTAATAAAGACGCATGGAACAAAGTGGCAAATATTATCTTCCTAGAGTCTCCAGCAGGAGTTGGATTTTCTTATTCAAAAAATTCTTTAGATTACTCTAACATTGGTGACAATAGCACAGCCAAAGATTCTTACATTTTTCTTCTAAATTGGCTTGAGAGATTTCCACAGTATAAGACTCGAGATTTCTTTATAGCTGGTGAAAGTTATGGTGGACATTATGTTCCTCAGCTAGCTCACCTTATTCTATCAAATAATAAGAAATTGAAAAATCACACAAGGATCAATTTGAGAGGGATCGCGGTAGGGAATGGTTGGATAGATGACAATTTGTGTACAAAGGGAATGTATGATTATTTCTGGATGGCTGGTCTAAACTCTGATGAAACACATGAAGGAATTGATAAACTTTGTGATTTTGGGAACTTCAACTATACAAATGAATGCAACTTATATCAAAGTAGAGCAAATGATGAGTTAGGAAATATTGACATTTACAACATATATGCCCCATTTTGTAATTCATCTGCAACAAAAACTAGTTATTCTGGTAGTGATTTTGACCCTTGTTCTGAAGATTATACTAATGCTTATTTAAACCTACCTAAAGTTCAAGAGGCTCTTCATGTTAAACCCACAAAATGGTCTTCTTGCAGTGATCTGAGTTGGACAGATAGTCCAGCAAGTATTCTACCAACTATAAATGGATTAATATCAAGTGGTATAAGCATATGGATATACAGTGGAGATATAGATGGACGTGTTCCTATAACCTCAACAAAGTATTCAATAAATTCCTTAAAACTGCCTGTGCATACAGCATGGCGTCCATGGTACACTGGAAAAGAGGTTGGAGGATATGTGATTGGTTACAAAGGGCTCGCACTTGTTACTGTTAGAGGAGCTGGACACATGGTTCCAAGTGACCAACCATACCGAGCACTAACCATGATCTCATCTTTCCTTCTTGGACAACTTCCTCCTCAATTAAACTCCTAA 1506 0.3645 MRGFNIEKTLTHYNIKMSSMLSQKVLLWSLIFLVCKANQQSEYLYKFIQSKRSQQKPSHVESYSSTIVDEHVSKVHVVEQQLRLMEDDKVKALPGQPKGVDFDQYAGYVTVDSKGGRELFYYFVESSLNSSTKPLILWLNGGPGCSSFGYGAMQELGPFRVNSDGTTLSLNKDAWNKVANIIFLESPAGVGFSYSKNSLDYSNIGDNSTAKDSYIFLLNWLERFPQYKTRDFFIAGESYGGHYVPQLAHLILSNNKKLKNHTRINLRGIAVGNGWIDDNLCTKGMYDYFWMAGLNSDETHEGIDKLCDFGNFNYTNECNLYQSRANDELGNIDIYNIYAPFCNSSATKTSYSGSDFDPCSEDYTNAYLNLPKVQEALHVKPTKWSSCSDLSWTDSPASILPTINGLISSGISIWIYSGDIDGRVPITSTKYSINSLKLPVHTAWRPWYTGKEVGGYVIGYKGLALVTVRGAGHMVPSDQPYRALTMISSFLLGQLPPQLNS* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0535 501 Gene3D - 359 390 - -
Mtr1g0535 501 Gene3D - 399 493 - -
Mtr1g0535 501 Gene3D alpha/beta hydrolase 82 353 IPR029058 -
Mtr1g0535 501 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 183 IPR001563 GO:0004185|GO:0006508
Mtr1g0535 501 PRINTS Carboxypeptidase C serine protease (S10) family signature 184 194 IPR001563 GO:0004185|GO:0006508
Mtr1g0535 501 PRINTS Carboxypeptidase C serine protease (S10) family signature 220 245 IPR001563 GO:0004185|GO:0006508
Mtr1g0535 501 PRINTS Carboxypeptidase C serine protease (S10) family signature 463 476 IPR001563 GO:0004185|GO:0006508
Mtr1g0535 501 Pfam Serine carboxypeptidase 94 492 IPR001563 GO:0004185|GO:0006508
Mtr1g0535 501 ProSitePatterns Serine carboxypeptidases, histidine active site. 463 480 IPR033124 GO:0004185
Mtr1g0535 501 PANTHER CARBOXYPEPTIDASE 29 495 - -
Mtr1g0535 501 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 29 495 IPR001563 GO:0004185|GO:0006508
Mtr1g0535 501 ProSitePatterns Serine carboxypeptidases, serine active site. 234 241 IPR018202 GO:0004185
Mtr1g0535 501 SUPERFAMILY alpha/beta-Hydrolases 90 494 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0535 Mtr-Chr1 6233769 6238436 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0535 1 6233769 6238436 Mtr1g0535 1 6233769 6238436 ECH