Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0529 ATGGAGGGAGTCACAAATTTATCTGTTGAACAAATTCAGCCCCCTACTTATGGGAACTTGGTAACCATTCTTAGTATTGATGGGGGAGGTATTAGGGGTCTCATCCCTGCTGCAATTATTGAATTCCTTGAATCTCACCTTCAGGAGTTGGATGGTGAAGATGCAAGGCTTGCAGATTACTTTGATGTGATCTCAGGAACAAGTACAGGAGGTCTTGTGACTGCCATGCTAGCTGCTCCTGATAAAAACAATCGTCCACTTTTTGCTGCCAAAGATATCAAGCCCTTTTACCTTGAACATTGCCCTAAAATTTTCCCACAACATAGAGGACTTGGTGCGACACTATTAGCAAAGGTAATGAGATCTCTTGGAGGACCCAAATATGATGGAAAATACCTTCATCAAGTTGTAAGAGAGAAACTTGGAGACATTCGCTTGCATGAAACCCTCACAAACATTGTTGTTCCCACATTCGACATCAAGACTTTGCAGCCAATTATTTTCTCATCTTATCAGCTTAAGAGATCCCCTTGTTTGGACGCTAAACTTTCAGACATATGCATTAGCACTTCAGCTGCTCCTACTTATCTCCCTGCTCACAACTTCACAAATAAAGATGATGAAGCTGGAAAAGAAGAGGAGTTCAATCTCATTGATGGTGGTGTTTGTGCAAATAATCCGGCTTTAGTTGCCATGAATGAAGTAACAAAGCAGATTATAAATCAAAGTCCTGATTTCTTTCCAATCAAGCCTCTGGAATATGGTCGTTTTCTGATAATTTCAATAGGCACTGGGACAGCAAAAAATGAGGAAAAGTTCACTGCACAAATGGCAGCCAAATGGGGATTATTAGATTGGTTAACACAGAGTGGTTCTAATCCCTTAATCGATGTTTTTACTCAATCAAGTGGTGATATGGTCGATTTTCATTTATCTGCTGTCACTCAAGCTCTTCATTCAGCTGATAATTACCTTCGAATTCAGGATGATACATTGACAGGAATCGATTCTTCAGTTGACATTGCTACAGAGGAGAACTTGAAGAAACTGTGCCAAATTGGTGAAAATTTATTAAAGAAACCGGTCTCTAGAGTCAATTTAGAAAATGGTCACTTTGAGCCACTGACAAATGGAGAAACCAATGAAGAAGCTCTCAAGAGGTTAGCAAAAATACTTTCACAAGAGAGGAGACTTAGAGAAATGAGATCCCCACATACAAGTAGAGGCAAGAAAGCCAGGCATCTGGTTTCATGA 1254 0.4003 MEGVTNLSVEQIQPPTYGNLVTILSIDGGGIRGLIPAAIIEFLESHLQELDGEDARLADYFDVISGTSTGGLVTAMLAAPDKNNRPLFAAKDIKPFYLEHCPKIFPQHRGLGATLLAKVMRSLGGPKYDGKYLHQVVREKLGDIRLHETLTNIVVPTFDIKTLQPIIFSSYQLKRSPCLDAKLSDICISTSAAPTYLPAHNFTNKDDEAGKEEEFNLIDGGVCANNPALVAMNEVTKQIINQSPDFFPIKPLEYGRFLIISIGTGTAKNEEKFTAQMAAKWGLLDWLTQSGSNPLIDVFTQSSGDMVDFHLSAVTQALHSADNYLRIQDDTLTGIDSSVDIATEENLKKLCQIGENLLKKPVSRVNLENGHFEPLTNGETNEEALKRLAKILSQERRLREMRSPHTSRGKKARHLVS* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0529 417 SUPERFAMILY FabD/lysophospholipase-like 19 369 IPR016035 -
Mtr1g0529 417 CDD Pat17_isozyme_like 18 370 - -
Mtr1g0529 417 MobiDBLite consensus disorder prediction 403 417 - -
Mtr1g0529 417 Pfam Patatin-like phospholipase 24 232 IPR002641 GO:0006629
Mtr1g0529 417 Gene3D Cytosolic phospholipase A2 catalytic domain 10 404 - -
Mtr1g0529 417 PANTHER PATATIN 1 408 - -
Mtr1g0529 417 MobiDBLite consensus disorder prediction 395 417 - -
Mtr1g0529 417 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 24 232 IPR002641 GO:0006629
Mtr1g0529 417 PANTHER XYLOSE ISOMERASE 1 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0529 Mtr-Chr1 6145558 6149719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0529 12 405 Miscellaneous Gene Families AT2G26560 66.582 0.0 527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0529 1 6145558 6149719 Mtr1g0529 1 6145558 6149719 ECH