Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0521 ATGTCTGTGAGGAGTGAACACCATCATACCGTTCCTCTTTCGGTTCTATTGAAGCGGGAGTTGATGAGCGAGAAAATTGAGAAGCCTGAGATTGTTCATGGTCAAGCTGGACAGAGTAAGAAAGGAGAGGATTTCGCGTTGTTAAAGTCTGATTGTCAGAGGATGGTTGGTGATGGGGTCTATACATATTCCGTCTACGGGCTATTTGATGGACACAATGGATCTGCTGCTGCTATTTATTCTAAGGAGAATCTTCTAAATAATGTTGTAAGTGCAATTCCTCCGGATCTTAACAGAGATGAGTGGTTAGCAGCGTTGCCTAGAGCTTTGGTTGCTGGCTTTGTCAAAACCGATAAAGATTTTGCAGAGAAAGGACAAAAATCAGGAACAACTGTCACCTTTGTGATTATAGAAGGATGGGTTGTAACAGTTGCATCAGTTGGCGATTCCCGCTGCGTACTAGAATCTTCTGAAGGAGGGATTTATTACTTGTCAGCAGATCATAGGCTAGAAACAAATGAAGAAGAGAGGGTTCGTATCACTTCTAGCGGCGGTGAGGTTGGTCGATTAAATACAGGGGGAGGTGCAGAGGTTGGTCCTTTGAGATGTTGGCCCGGTGGCCTGTGTCTTTCACGGTCTATTGGAGATATGGATATTGGTGAATTTGTTGTCCCTGTACCATATGTAAAACAAGTGAAGCTGTCCACCGCTGGAGGCAGGCTTGTTATCTGCAGCGATGGTGTTTGGGATGCTTTACCTGCAGAAGTGGCCCTTGACTGTTGTCGTGGCATGTCAGCAGAGTCTGCTGCACCACAGATTGTAAAAGAAGCTTTACAAGCAAAGGGACTTAGAGATGATACAACCTGTGTTGTTGTCGATATATTACCTCAGGAGAAGCCACCTGCTCCTGTACCACATCAAAAGAAGCCAGTAAAAGGAATGCTCAAGGCCATGTTTCGTAAAAAGTCTTCGGAATCATCATCTATTGACAAAGAATACATGGAGCCAGATGTGGTAGTGGAGCTGTATGAGGAAGGCTCTGCTATGCTTTCAGAGAGGTTAGAAACAAAATATCCACTATGCAACATGTTCAAGTTGTTCATATGTGCAGTATGTCAAGTAGAAATAAAACCCGGAGAGGGTATTTCAGTACATGAGGGTGCAGAAAACCCTCAAAAAGTGCGCCCCTGGGATGGACCTTTCCTTTGCTTTAGTTGCCAGGAGAAGAAAGAAGCCATGGAAGGGAAAAGATCATTAGATAGACTTAGCAGCGGAAGTGACGAATGA 1287 0.4444 MSVRSEHHHTVPLSVLLKRELMSEKIEKPEIVHGQAGQSKKGEDFALLKSDCQRMVGDGVYTYSVYGLFDGHNGSAAAIYSKENLLNNVVSAIPPDLNRDEWLAALPRALVAGFVKTDKDFAEKGQKSGTTVTFVIIEGWVVTVASVGDSRCVLESSEGGIYYLSADHRLETNEEERVRITSSGGEVGRLNTGGGAEVGPLRCWPGGLCLSRSIGDMDIGEFVVPVPYVKQVKLSTAGGRLVICSDGVWDALPAEVALDCCRGMSAESAAPQIVKEALQAKGLRDDTTCVVVDILPQEKPPAPVPHQKKPVKGMLKAMFRKKSSESSSIDKEYMEPDVVVELYEEGSAMLSERLETKYPLCNMFKLFICAVCQVEIKPGEGISVHEGAENPQKVRPWDGPFLCFSCQEKKEAMEGKRSLDRLSSGSDE* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0521 428 SUPERFAMILY PP2C-like 32 294 IPR036457 -
Mtr1g0521 428 PANTHER ALPHABET, ISOFORM E-RELATED 6 422 - -
Mtr1g0521 428 SMART PP2C_4 22 292 IPR001932 -
Mtr1g0521 428 Pfam Protein phosphatase 2C 58 283 IPR001932 -
Mtr1g0521 428 CDD PP2Cc 37 294 IPR001932 -
Mtr1g0521 428 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 6 422 - -
Mtr1g0521 428 SMART PP2C_SIG_2 40 294 IPR001932 -
Mtr1g0521 428 ProSiteProfiles PPM-type phosphatase domain profile. 25 294 IPR001932 -
Mtr1g0521 428 Gene3D - 31 300 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0521 Mtr-Chr1 6062328 6068367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0521 1 427 PP2C-type Phosphatase Gene Family AT1G47380 76.690 0.0 693
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0521 1 6062328 6068367 Mtr1g0521 1 6062328 6068367 ECH
Mtr1g0521 1 6062328 6068367 Mtr3g3636 3 50186567 50191541 PCT