Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0519 ATGCAAGCTTGGGGGAGGTTAGGAGGTTACATAAGACGTGGTGTTAGCAGTTTTTCCGGGCCGTTTCTTCCGTTTGGAGGGGCGGTTGATATAATTGTTGTTCAGCAGAAAGATGGGAGCTTTAAATCATCTCCTTGGTATGTTAGATTTGGGAAATTTCAAAGGGTTATGAAGGCGGCGAAAAGGGAAAAGGTTAAGGTTAGTGTTAGTGTTAATGGGGTTGAAACTGATTTTCATATGTGTTTGAATCCTAAAGGGGAAGTTTTTTTTCTTCATGCAAATAACCAACTTGGGGAAGAAGAATTGGAAGAACAAGAGGAATGGGAATTAGCCGAGGAAGAAGATGAACTTAGAGGTAGTAATAAGAGGCAATTCAAGTCAAAAAGTGCAAATTTTGGTTTAGAGGATCGTGTTGTAGCTATGAATGATTCTCGGAATTCGAGAGTAAATAGACTTGTATTTGGGCCAAGGTCCGGTGGTGGTGATGCAGATTTGGTGGAGCGTGCTGAGGTTGCAGCCAAATTGTTGGATTTAAGGTGGTCTACAAATCTCAGTTTTGATGAACTTCCTCATACAGAAAGAAAGAAAACTCGGGCAGTTAACTTGGACAAGGAGAAAGTCAAGTTTGAATCCGGCGAGGTTTTGCAGACTGAGGGTGGAAAAACCGAGGTAGTGATTAAGGGTGTTGATCTAGAGATACCGGTAAAGGATTGCGGTAATTGTGATGTTGCGGATTTTGGACGCATAGCGAAGTTCCAAAAATCTCGAACTGTCAATATTGGTCGAAGGGATTGTTCTGTTAAGAAGGTTAGTGTAAATACTCCAACGTCTGAACAACTGTCATCCTTGAATCTGAAGGAAGGGAGAAACACAATAACCTTCTGTTTCTCTACACCTATGATGGGGATGCGGCAGATTGATGCTCGGATATTTTTGTGGAAATGGAATACTCGTATAGTGATATCAGATGTGGATGGGACTATTACAAGGTCAGACGTTCTAGGTCAATTCATGCCTTTAGTTGGGATTGATTGGTCACAGACAGGAGTTGCTCATTTATTTTCAGAAATCAAGGAAAATGGCTACCAGTTACTTTTTCTCAGTGCTCGTGCAATTTCTCAGGCATATCACACCAGACAATTCCTATCCAACCTTAACCAGGATGGCAAAGTCTTACCAGATGGTCCTGTTGTAATTTCCCCTGACGGACTTTTTCCTTCTCTATATAGAGAAGTTATCCGCAGGGCTCCTCACGAGTTCAAAATTGCATGTTTAGAGGACATCAGGGCACTTTTTCCTCCTGATTCAAATCCGTTCTATGCTGGTTTTGGAAATAGAGACACTGATGAAATCAGTTACCTTAAGGTTGGAATCGCTAAAGGAAAGATATTCATAATTAATCCCAAGGGTGAGATTTCTGTAAACCGACGTTGCTTAGACACAAAATCATACACTTCTCTTCATGCTCTGGTGAATGGAATGTTCCCCCCTACAGACTCATCTGAGCAGGAGGATTTCAATTCATGGAATTTCTGGAAGTTGCCCTCTTTCTAA 1554 0.4151 MQAWGRLGGYIRRGVSSFSGPFLPFGGAVDIIVVQQKDGSFKSSPWYVRFGKFQRVMKAAKREKVKVSVSVNGVETDFHMCLNPKGEVFFLHANNQLGEEELEEQEEWELAEEEDELRGSNKRQFKSKSANFGLEDRVVAMNDSRNSRVNRLVFGPRSGGGDADLVERAEVAAKLLDLRWSTNLSFDELPHTERKKTRAVNLDKEKVKFESGEVLQTEGGKTEVVIKGVDLEIPVKDCGNCDVADFGRIAKFQKSRTVNIGRRDCSVKKVSVNTPTSEQLSSLNLKEGRNTITFCFSTPMMGMRQIDARIFLWKWNTRIVISDVDGTITRSDVLGQFMPLVGIDWSQTGVAHLFSEIKENGYQLLFLSARAISQAYHTRQFLSNLNQDGKVLPDGPVVISPDGLFPSLYREVIRRAPHEFKIACLEDIRALFPPDSNPFYAGFGNRDTDEISYLKVGIAKGKIFIINPKGEISVNRRCLDTKSYTSLHALVNGMFPPTDSSEQEDFNSWNFWKLPSF* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0519 517 Pfam LNS2 (Lipin/Ned1/Smp2) 274 496 IPR013209 -
Mtr1g0519 517 PANTHER LIPIN 254 516 IPR026058 -
Mtr1g0519 517 PANTHER LIPIN 1 198 IPR026058 -
Mtr1g0519 517 Pfam lipin, N-terminal conserved region 18 96 IPR007651 -
Mtr1g0519 517 SMART lns2 319 475 IPR031315 -
Mtr1g0519 517 SUPERFAMILY HAD-like 312 459 IPR036412 -
Mtr1g0519 517 Coils Coil 103 123 - -
Mtr1g0519 517 PANTHER GH19076P 254 516 - -
Mtr1g0519 517 PANTHER GH19076P 1 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0519 Mtr-Chr1 6043169 6050157 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0519 1 6043169 6050157 Mtr1g0519 1 6043169 6050157 ECH
Mtr1g0519 1 6043169 6050157 Mtr3g3638 3 50210666 50217654 PCT