Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0513 ATGGATGTTTCAAATCTTCATAAGTTGGTGAAGACAGCACCATCCAAAGCTTTGATTATGAGATTCAATTTGTTATGTCTTTCCATCTTTCTCATTGTTTATGCAACCCTTCTTCTTCGTCCTTCTTCTTCAGTCTATTTCGATAATGCAGCCTCGCTTGTTCGATGCTCATTGAGAGAATGCCATCACAAGGGAGAAGATAGCATGAAAATGAAAGCAGTATTGGAAGAATTACCAAAAGCAAAATCAAGGAACCCAAAGAATGGAACTAAGATAGAAGTACCAAGTTTTTTAGGCGAAAAAATCGGTAAGGGAATTAAAATTGGAATGGTGAACATGGACGAAGACGACGATGTAAGCGAATGGAACGTACATGGAGAAACAATACCAATTAATTTCGACAAAGTATCACAATTTTTCAACTGGACAGATTTATTTCCCGAATGGATCGACGAAGAAGAAGAAAGCGATGTTCCAACATGTCCCGAGTTACCAATGCCCGAATTCGCAACATATGAAAACATGGACATAATAGTTGCAAAGTTACCATGCAAGTATCCATTAGAAGGGTGGGGGAGAGAAGTTTTAAGGTTACAAGTTCATCTTATAGTTGCAAATATGGTTGTGAAGAAAGGAAAAAAGGATTGGAAATGGAAGAGTAAGGTTGTGTTTTGGAGTAAATGTAGACCAATGTTAGAGATTTTTAGATGTGATGATTTGGTTAAACATGAAGGTGATTGGTGGTTTTATGAAGTTGATGTAAAGAAGTTGGAGCAGAAAATTTCTTTGCCTGTTGGGTCTTGCAATTTGGCTTTACCTCTATGGGAACAAGGGATTGACAAAGTATATGACATATCCAAAATGGAACAAAACGTAAGAAGCAAAACAAGAGCAAAACATGAAGCCTATGCAACAGTACTTCACTCCTCAGAAAGCTACGTTTGTGGAGCAATAACACTTGCACAAAGCCTCTTAAAAACAGGAACCAACCGTGACCTTATACTTCTCATCGACAGCTCCATCTCCGTCCGCAAACGCCGTGCACTGGCAGGTGCCGGTTGGAAGATTCGAACCATCACCCGAATCCGAAACCCTAGAGCAGAAAATGGAACATATAATGAGTACAATTATAGTAAGTTTCGGTTGTGGCAACTTACTGATTATGAGAAAATCATCTTTATAGATTCTGATATTCTTGTGCTGAGGAATCTTGATATTCTCTTCAACTTCCCTCAAATGTCTGCCACTGGGAATGATCAGTCTATTTTCAACTCTGGCATCATGGTTATTGAGCCTTCCAATTGTACCTTCAGCGTGCTTATGAGCCGGCGCCATGACATCGTATCATACAATGGAGGTGATCAAGGGTTCCTAAATGAGATATTTGTGTGGTGGCATAGACTTCCAAGGAGGGTAAATTATTTAAAGAATTTTTGGGCCAACACAACAGTGGAAGCAAGTGTGAAAAATGGATTATTTGCTGCTGACCCTCCAAAACTATATGCTATCCATTACCTTGGTTTGAAACCTTGGCATTGCTATAGAGACTATGATTGCAATTGGGATGTAATGGATCAAAGGGTTTATGCTAGTGACGTGGCACACCAACGTTGGTGGAATTTTCATGATAGAATGGACAAGAAGTTACAAAGTTTTTGTAGGTTGACAAGACAACGTAGGACTGAGTTAAATTGGGAAAGGAGAAGATCTAATAAGATGGGATCACTTGATTATCATTGGAGGATTAATGTCACAGATCCTAGAAAATCTGGATCTCTTTTGATGGATTAG 1791 0.3903 MDVSNLHKLVKTAPSKALIMRFNLLCLSIFLIVYATLLLRPSSSVYFDNAASLVRCSLRECHHKGEDSMKMKAVLEELPKAKSRNPKNGTKIEVPSFLGEKIGKGIKIGMVNMDEDDDVSEWNVHGETIPINFDKVSQFFNWTDLFPEWIDEEEESDVPTCPELPMPEFATYENMDIIVAKLPCKYPLEGWGREVLRLQVHLIVANMVVKKGKKDWKWKSKVVFWSKCRPMLEIFRCDDLVKHEGDWWFYEVDVKKLEQKISLPVGSCNLALPLWEQGIDKVYDISKMEQNVRSKTRAKHEAYATVLHSSESYVCGAITLAQSLLKTGTNRDLILLIDSSISVRKRRALAGAGWKIRTITRIRNPRAENGTYNEYNYSKFRLWQLTDYEKIIFIDSDILVLRNLDILFNFPQMSATGNDQSIFNSGIMVIEPSNCTFSVLMSRRHDIVSYNGGDQGFLNEIFVWWHRLPRRVNYLKNFWANTTVEASVKNGLFAADPPKLYAIHYLGLKPWHCYRDYDCNWDVMDQRVYASDVAHQRWWNFHDRMDKKLQSFCRLTRQRRTELNWERRRSNKMGSLDYHWRINVTDPRKSGSLLMD* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0513 596 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 299 550 IPR029044 -
Mtr1g0513 596 SUPERFAMILY Nucleotide-diphospho-sugar transferases 302 550 IPR029044 -
Mtr1g0513 596 CDD GT8_Glycogenin 301 545 - -
Mtr1g0513 596 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 2 7 589 IPR030519 GO:0005794|GO:0009834|GO:0015020|GO:0045492
Mtr1g0513 596 Pfam Glycosyl transferase family 8 306 512 IPR002495 GO:0016757
Mtr1g0513 596 PANTHER GLYCOGENIN SUBFAMILY MEMBER 7 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0513 Mtr-Chr1 5969278 5972743 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0513 71 595 Glycosyltransferase AT4G33330 67.608 0.0 756