Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0509 ATGGAGGAAGTTGAAGACAAACCAACCTCCTCAAGAAATGTCGAACCAAATTCACTAGCAGATGCTCCTCAAGAAAATACCGATATAATAACAGCTCCAACCGATAATCACTCTTCCATTGAAGCTTCCATCAACTCACTAGCTGATAAAAATATAGTGGAACATGACACTCATTTTCAAGAGACTAATTTCTCTGAAATAGAATCAAAGTCAACGCGTGCTTCTGATGAGCAATCTATAGGACAAGATGAACATCTTCTCACAGATGATTCAATTTCAACACCAAAAGAAGAAACAGTTCATGAAATAGAAGAAAACCACCTAGGAGCCATAACTTCAGATTCTGAACTTGAAGCTTTAGAAGATATACAAGATGGTGGTTCAACTGTTACTGCTAACGGCGATGTTGATCATAATCTTATGGAACTCTCAACATCCTCTTCTGTAACAGAAGATTTGCAGATTGACCCTAAAGATCGTCCTCAAACCGAAGTTATTGATGCTCCTCAAGAAAATTTAGCCTCAACCTCAGATGCTGAAGTTCATGTAACAGAACAAAGTCACCAGGAACCTGTGGTTACAGATTCTGAACAAGAAACTTTAGATGATATTGTGAACATGCATAAGGATGGTGGTTTTAGTGATAGTTTTTTAGATAATCAGCTGGATCTAACGGCTTCATCTTCTGAAACAGAAGAGTTTCAGAATGATCACAAAGAACTAAAGGTAAATCTGCCTCAAATCAAGATTCCTGATGTTGCTGTTGGAGGTGCCGACTCACCTGCAAGTGAGAAGAAAATTGCTGAAAATAGAGGCATAATTGATACGGCAGCTCCATTTGAATCTGTCAAGGAAGCTGTTTCTAAGTTTGGAGGGATTGTCGATTGGAAGGCTCATCGAATGATAGCCGTCGAGCGAAGCAAGGAAGTAGAACAACAGCTTGAAAAATTGTACGAGGAGATTCCGGAGTACAGGAAAAGATCGGAGGACTCCGAGCAAGAAAAAGTCCAAGTACTTCAGGAGCTTGACAGCGCTAAGAGACTAATAGAAGAACTAAAACTGAGCCTAGAGAGGGCACAAACCGAAGAGCATCAAGCAAGGCAAGACTCAGAACTTGCAAAGCTCAGAGTGGAAGAAATGGAGCAAGGTATTGCCGAAGATTCCAGTGTGGCAGCCAAGGCGCAACTCGAGGTTGCCAAAGCAAGGTATACGAGTGCCATTACGGAGTTAACATCGGTGAAACACGAGTTAGATTCGTTGCGTGTGGAATACGCTTCTTTAGTTGATGAAAAAGGCGAAGCTATTGACAAAGCCGAAGATGCTGTTGCTGCATCGAAGCAAGTAGAAAAGACGGTTGAAGATTTGACTATTGAGTTGATTGCCACAAAAGAGTCTTTGGAATCAGCACATTCTGCACATATGGAAGCAGAAGAACACAGAATAGGAACAGTCATGGCAAGAGATCAAGATTCTCTCAATTGGGAGAGGGAACTAAAACAAGAAGAACAAGAACTAGAAAAACTCAATCAAAAAATTTTGTTTGCTATGGATCTTAAATCTAAACATAGTAAAGCTTCTGCGTTGCTTCTTGATTTGAAAGCTGAGTTAAATGCCTATATGGAATCAAAGTCAAACCAAGAAGGAGATGATGATGAAGGAGTCTCAAAGGAGCAACTGGACAAGTCACATATTGAAATGCAAGCGGCAGTTGAGTCGGCTAAAAAGGAACTTGAAGAAGTAAAGCTTGACATAGAGAAAGCTACTTCTGAGGTAAATAACTTAAAGGTGGCTGCAACATCATTAAGATCAGAACTCGAACAAGAGAAATCATCGCTTGCCTCGATTGGGCAAAGAGAGGGAATGGCCTCGATTACAGTTGCGTCTATCGAAGTCGAGCTGAACAAAACTAAATCGGATATTGCTTTTGTTCAGATGAAGGAAAAAGAAGGCAAAGAGATGATCCTTGAGCTGCCAAAGAAGCTTCAAGAAGCGTCTGAAGAGGCAAATAAGGCCAACTTGCTTGCTCGAGAAGCTTGCGAAGTGTTTAGGAGAGTAAAGGAGGAAGCAGAACAAGCCAAGGCCGGTGCTAGTACAATGCATAGTAGATTACTTGCAGCTCAAAAGGAGATAGAAGCTGCAAGAGCTTCAGAAAGGTTGGCAATACAAGCAATTAAAGCATTGCAAGAGAGCGAGTCGGCTAGAAGCAACAACAATGAAGTGGATCCATCAAATGGTGTGATACTATCAGTTGAAGAGTACTATCGTATAACGAAACAAGTTCATGATGCAGAAGAAAGAGCCAATTCGAGAGTTGCAACGGCAAATTCTGAGATCGATATAGCTAAGGAGACTGAATTGAAAACAATGGAGAAGTTGAATGAAGTGAACAAAGAAATAGTTGCTAGAAGGGAATCATTGAAGATTGCTATGGATAAATCTGAGAAGGCAAGGGAAGGAAAATTAGGTGTAGAGCAAGAATTAAGAAAGTGGAGAGCAGAACATGGACAACGGAGAAAAGCCGGTGAAATAGGCCAAAATGTAGTAAACCAGAACATAAACCATAGTGGTAAACTTGATCAAAATCATAGTGAAACTATTCCTGTACATTACTTTTCAAGTCCTAAGTCTTATGTTCATGCAAACAACGAAAATGGATCCTCGCCAGATGTGAAAAGTGGAAAGAAGAAGAAAAAGTCATTGTTTCCGCGAATTTTTATGTTCTTTGCAAGAAGAAAAGCACATCCAACTCCTTCGGGGTAG 2760 0.4051 MEEVEDKPTSSRNVEPNSLADAPQENTDIITAPTDNHSSIEASINSLADKNIVEHDTHFQETNFSEIESKSTRASDEQSIGQDEHLLTDDSISTPKEETVHEIEENHLGAITSDSELEALEDIQDGGSTVTANGDVDHNLMELSTSSSVTEDLQIDPKDRPQTEVIDAPQENLASTSDAEVHVTEQSHQEPVVTDSEQETLDDIVNMHKDGGFSDSFLDNQLDLTASSSETEEFQNDHKELKVNLPQIKIPDVAVGGADSPASEKKIAENRGIIDTAAPFESVKEAVSKFGGIVDWKAHRMIAVERSKEVEQQLEKLYEEIPEYRKRSEDSEQEKVQVLQELDSAKRLIEELKLSLERAQTEEHQARQDSELAKLRVEEMEQGIAEDSSVAAKAQLEVAKARYTSAITELTSVKHELDSLRVEYASLVDEKGEAIDKAEDAVAASKQVEKTVEDLTIELIATKESLESAHSAHMEAEEHRIGTVMARDQDSLNWERELKQEEQELEKLNQKILFAMDLKSKHSKASALLLDLKAELNAYMESKSNQEGDDDEGVSKEQLDKSHIEMQAAVESAKKELEEVKLDIEKATSEVNNLKVAATSLRSELEQEKSSLASIGQREGMASITVASIEVELNKTKSDIAFVQMKEKEGKEMILELPKKLQEASEEANKANLLAREACEVFRRVKEEAEQAKAGASTMHSRLLAAQKEIEAARASERLAIQAIKALQESESARSNNNEVDPSNGVILSVEEYYRITKQVHDAEERANSRVATANSEIDIAKETELKTMEKLNEVNKEIVARRESLKIAMDKSEKAREGKLGVEQELRKWRAEHGQRRKAGEIGQNVVNQNINHSGKLDQNHSETIPVHYFSSPKSYVHANNENGSSPDVKSGKKKKKSLFPRIFMFFARRKAHPTPSG* 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0509 919 Coils Coil 789 809 - -
Mtr1g0509 919 Coils Coil 491 518 - -
Mtr1g0509 919 MobiDBLite consensus disorder prediction 145 196 - -
Mtr1g0509 919 MobiDBLite consensus disorder prediction 168 194 - -
Mtr1g0509 919 MobiDBLite consensus disorder prediction 1 37 - -
Mtr1g0509 919 MobiDBLite consensus disorder prediction 11 37 - -
Mtr1g0509 919 Coils Coil 410 430 - -
Mtr1g0509 919 MobiDBLite consensus disorder prediction 57 99 - -
Mtr1g0509 919 Pfam Weak chloroplast movement under blue light 271 837 IPR008545 -
Mtr1g0509 919 Coils Coil 300 369 - -
Mtr1g0509 919 MobiDBLite consensus disorder prediction 877 897 - -
Mtr1g0509 919 PANTHER WEB FAMILY PROTEIN-RELATED 266 914 - -
Mtr1g0509 919 PANTHER WEB FAMILY PROTEIN-RELATED 18 78 - -
Mtr1g0509 919 MobiDBLite consensus disorder prediction 70 99 - -
Mtr1g0509 919 Coils Coil 556 611 - -
Mtr1g0509 919 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 18 78 - -
Mtr1g0509 919 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 266 914 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0509 Mtr-Chr1 5944817 5949140 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0509 1 5944817 5949140 Mtr1g0509 1 5944817 5949140 ECH
Mtr1g0509 1 5944817 5949140 Mtr3g3642 3 50253890 50260631 PCT