Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0505 ATGGATTCAACTTTGGCTTACATCATTGTCCTCTTTCTTCTTACCTTATTTTCATTTAAGTTCTTTCCAAAACGACCTAAAACAAAACAAACAAGTGCAAAACTTCCTCCTGGTTCAATGGGGTGGCCGTACATAGGACAAACCCTTCAACTCTACTCCCAAGACCCAAATGTTTTCTTCTTCTCCAAACAAAAAAGGTACGGAGAAATATTCAAGACGAACATTCTTGGATGTAAGTGTGTGATGTTGGCAAGTCCTGAAGCTGCACGTTTTGTGTTGGTGACACAATCTCACTTATTTAAACCAACATATCCTAAAAGCAAAGAACGTTTGATTGGTCCTTGTGCTTTGTTTTTCCACCAAGGTGAGTATCACTTGCGTTTGAGGAAGCTTATTCAGAGGTCTCTCTCCCTCGATTCACTTCGCAACTTGGTTCCTGAAATTGAAGCCCTAGCCGTATCCACCATCAAATCTTGGGGTGACGATGGATGCATGATTAACACTTTTAAGGAAATGAAAAAATTTTCTTTTGAAGTTGGTATTCTCAAAGTTTTTGGAAATCTAGAGCCGAGGTTGAGGGAAGAGCTAAAGAAGAATTATTGGATTGTTGACAATGGTTACAATTCTTTTCCAACTCAAATTCCTGGTACACAATACAAAAAGGCACTCTTGGCAAGAGAGAAACTTGGAAGTATTTTGAAGGAAATAATTAGTGAGAGGAAGGAGAAGAAGTTGCTTGAAAGTGAAAGAGATCTTTTGAGCTGTTTATTGAATTGGAAAGGAGAAGGAGGAGAAATTTTATCTGATGATGAAATTGGAGATAACATTATTGGAGTGCTTTTTGCTGCTCAGGATACCACAGCTACTGTCATGACATGGGTGATCAAGTACTTGCATGATCAACCAAAACTTCTCGAATGTGTAAAGGCTGAGCAGAAGGCAATTCACATGGAAAATGATGGTAAACTACAGCTGAATTGGAATCAGACTAGAAACATGCCAATTACCTATAAGGTTGTGTTAGAGAGCATGAGAATGGCAAGTGTTATATCATTTCCATTTAGAGAAGCAGTAGCTGATGTAGAGTACAAGGGATTCCTAATCCCAAAAGGGTGGAAAGCAATGCCACTGTTCAGAAATATTCATCATAATCCTGAATTTTTTCCAGAGCCTCATAAATTCAACCCTTCAAGATTTGAGGTTTCACCAAAACCAAATACTTTCTTGCCATTTGGTAGTGGAGTACATGCTTGTCCTGGCAATGAACTTGCTAAGCTGGAGACCCTTATTATGATCCATCATTTGGTCACCAAGTTTAGGTTGGAAGTGGTAGGATCACAATGTGGGATTCAATATGGTCCATTTCCATTGCCTTTGAATGGACTCCCAGCCAGGTGTTGGAGAGAATCTACCAGCATTGCTAGAAAAAGATTCATTGGGCAGAAATGA 1449 0.392 MDSTLAYIIVLFLLTLFSFKFFPKRPKTKQTSAKLPPGSMGWPYIGQTLQLYSQDPNVFFFSKQKRYGEIFKTNILGCKCVMLASPEAARFVLVTQSHLFKPTYPKSKERLIGPCALFFHQGEYHLRLRKLIQRSLSLDSLRNLVPEIEALAVSTIKSWGDDGCMINTFKEMKKFSFEVGILKVFGNLEPRLREELKKNYWIVDNGYNSFPTQIPGTQYKKALLAREKLGSILKEIISERKEKKLLESERDLLSCLLNWKGEGGEILSDDEIGDNIIGVLFAAQDTTATVMTWVIKYLHDQPKLLECVKAEQKAIHMENDGKLQLNWNQTRNMPITYKVVLESMRMASVISFPFREAVADVEYKGFLIPKGWKAMPLFRNIHHNPEFFPEPHKFNPSRFEVSPKPNTFLPFGSGVHACPGNELAKLETLIMIHHLVTKFRLEVVGSQCGIQYGPFPLPLNGLPARCWRESTSIARKRFIGQK* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0505 482 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 411 420 IPR017972 GO:0005506|GO:0016705
Mtr1g0505 482 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 8 467 - -
Mtr1g0505 482 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0505 482 PRINTS E-class P450 group I signature 271 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0505 482 PRINTS E-class P450 group I signature 291 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0505 482 PRINTS E-class P450 group I signature 377 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0505 482 PRINTS E-class P450 group I signature 408 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0505 482 PRINTS E-class P450 group I signature 418 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0505 482 Pfam Cytochrome P450 36 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0505 482 PRINTS P450 superfamily signature 282 299 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0505 482 PRINTS P450 superfamily signature 338 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0505 482 PRINTS P450 superfamily signature 409 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0505 482 PRINTS P450 superfamily signature 418 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0505 482 Gene3D Cytochrome P450 25 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0505 482 SUPERFAMILY Cytochrome P450 32 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0505 482 PANTHER CYTOCHROME P450 26 8 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0505 Mtr-Chr1 5916281 5920266 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0505 27 470 Cytochrome P450 AT3G19270 66.517 0.0 628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0505 1 5916281 5920266 Mtr4g2796 4 41657163 41660135 ECH
Mtr1g0505 1 5916281 5920266 Mtr1g0505 1 5916281 5920266 ECH