Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0501 ATGCGTGATTTAGGGTTTCACGAACAACGACGCTCGTGGAGGCGTAACACCGGTTCAAGAACACGCAACACCACCGCCAACACCGTCACCGGCGGCGGCGATACAAGTCCTGACTCCGTCATCTTCACTCTCGAATCTAACTTAAGTCTCTTCTCCTCCGCTTCCGCCAGCGTCGATCGCTGCTCCTTCGCTTCCGATGCTCACGACCGCGACTCCTTAAACTCCGAAATCTCACTGCATTTGGCAGGTCACGGTGGTGATTTTGCTCCCAGTGAAAGCTGGAGTGGTCCAGATCCGGATCCGGATCCGAATCAAAATCATAACAGAAAACAACATGCAGATTCAGATTCAGTTCAGAAAAAGAAACTTGGCGAAACTCTTTTCTCTGGAAAAGCAGAAAAAACAAAAGTTCAAAAGGAAGATAGTGACATTGATTCTAAAGACGGAAATCAACTTTCGGAATTTGATTCTGCGAGAAACTCTTTCTCTCTAGCTCTCAAAGAATGTCAAGATCGGAGATCGAGATGTGAATCTTTATTTAAAAAGCAAGATCGGCGAAGACCTGCTTCGTTAGATCTGAACAATGCTAATGCAACTGGAACTGGTTCTTCGCCTCGATTAGTTGGAGCTGTGAAGAAGAGTATGGTTCAGTCTAGGAAATCGGGAACGGGTACAGCGACGGGGACTGGTACATTTCCGAGTCCTGGGACTCCGAATTATCGTCATTGTCAAGGCGGTGTTGCAATGCAAAAAGGTTGGAGTTCTGAGAGAGTTGCAAGTGGGGGCCGCAAGCAAGTTGGTAATGGTGTGACTGCTTTGTGTTTAAGTAATGGGAGAACGTTGCCGTCGAAGTGGGAAGATGCTGAGAGGTGGATTTTGAGTCCTGTTTCAGGGGGTGATGGAACTGGAAGGGTTTCAGTTCCACAGCCATTAAGGAGGCCGAAGTCGAAGAGTGGTCCGCTTGGTCCACCTGGTGTTGCGTATTATTCGTTGTATTCGCCTGCAGGTCACTTTTTTGATGGAGGGAATTTTATGACGGCTGCTTCACCTTTTTCTGCTGCTGTTAATGCTTCAGCTGATGGGTTTACAAATAGTTCTGGTGGCAATGGTGGTGGAGGGCTTCCCACACGAACGGATCCTTGCATGGCTCGCTCAGTTAGTGTACATGGATGCTCTCAGATGCAGGGTCAATCGTCGATTCCTTCCCGAGAGGAGAAGTTTGATGCTTTCAAGGATGCGGGCACCAATGTATCTCCTGCTGTTTCAAGAAGGGACATGGCAACCCAGATGAGCCCAGAGGGTAGCTCGTGCTCCTCTCCCAATATGATGACTTCTTTCTCTGCTTCCATTCCACCTACCCTGCCCGTAACCGATTTGCAGAGTATCTCTTTCTCTAAAATGGATATCAGGGATGTGCAGGTGGATGAACGTGTAACCATGACAAGGTGGTCCAAGAAGCACAAGGCCCTATTCACTGGTAGAGGTTCAGAAAATGTTGACAGCTGGAAAAAGAAAGAAACCAGCACTCGATCTTCATCTTGGGAAATTTCTGAACGCTCAAAGACTGTTTCGAAGGCTAAAAGGGAGGAAGCCAAAATCACCGCATGGGAAAATTTGCAAAAGGCAAAAGCTGAAGCAGCAATACAGAAACTAGAGATGAAGTTGGAAAAGAAGCGAGCATCTTCCATGGATAAGATTATGAACAAACTGAAATTCGCTCAGAAAAAGGCTCAGGAAATGAGGAGTTCAGTTTCAGTCGACCAGGCTCATCAAGTTGCCAGAACTTCTCACAAGGTTATGTCATTTCGGAGAGCTGGCCAGATGGGTTCTTTGAGTGGTTGTTTCACCTGTCATGCCTTTTAA 1863 0.4718 MRDLGFHEQRRSWRRNTGSRTRNTTANTVTGGGDTSPDSVIFTLESNLSLFSSASASVDRCSFASDAHDRDSLNSEISLHLAGHGGDFAPSESWSGPDPDPDPNQNHNRKQHADSDSVQKKKLGETLFSGKAEKTKVQKEDSDIDSKDGNQLSEFDSARNSFSLALKECQDRRSRCESLFKKQDRRRPASLDLNNANATGTGSSPRLVGAVKKSMVQSRKSGTGTATGTGTFPSPGTPNYRHCQGGVAMQKGWSSERVASGGRKQVGNGVTALCLSNGRTLPSKWEDAERWILSPVSGGDGTGRVSVPQPLRRPKSKSGPLGPPGVAYYSLYSPAGHFFDGGNFMTAASPFSAAVNASADGFTNSSGGNGGGGLPTRTDPCMARSVSVHGCSQMQGQSSIPSREEKFDAFKDAGTNVSPAVSRRDMATQMSPEGSSCSSPNMMTSFSASIPPTLPVTDLQSISFSKMDIRDVQVDERVTMTRWSKKHKALFTGRGSENVDSWKKKETSTRSSSWEISERSKTVSKAKREEAKITAWENLQKAKAEAAIQKLEMKLEKKRASSMDKIMNKLKFAQKKAQEMRSSVSVDQAHQVARTSHKVMSFRRAGQMGSLSGCFTCHAF* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0501 620 MobiDBLite consensus disorder prediction 181 239 - -
Mtr1g0501 620 PANTHER OS02G0116800 PROTEIN 111 618 - -
Mtr1g0501 620 MobiDBLite consensus disorder prediction 190 204 - -
Mtr1g0501 620 MobiDBLite consensus disorder prediction 1 15 - -
Mtr1g0501 620 MobiDBLite consensus disorder prediction 81 154 - -
Mtr1g0501 620 Coils Coil 539 561 - -
Mtr1g0501 620 MobiDBLite consensus disorder prediction 1 37 - -
Mtr1g0501 620 PANTHER REMORIN FAMILY PROTEIN 111 618 - -
Mtr1g0501 620 MobiDBLite consensus disorder prediction 216 238 - -
Mtr1g0501 620 MobiDBLite consensus disorder prediction 294 320 - -
Mtr1g0501 620 Coils Coil 563 583 - -
Mtr1g0501 620 MobiDBLite consensus disorder prediction 103 152 - -
Mtr1g0501 620 MobiDBLite consensus disorder prediction 18 37 - -
Mtr1g0501 620 Pfam Remorin, C-terminal region 506 608 IPR005516 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0501 Mtr-Chr1 5835068 5839800 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0501 1 5835068 5839800 Mtr1g0501 1 5835068 5839800 ECH