Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0500 ATGGGTTCCGAACAACAAATACATGGAGATTATCTATTTCTGAGGCCACAAGAAGCAAGTGTTGTGGAACTAGGAAGCCTTTTGTTTTCATCAAACTTAGCAAATAGAAGCTTCATTGATTGTCCACAAGGACTTGAAGCAAGAAAATTTCGACAAAGATGGCTTCTTTTTACTTCAGTTGTTGCACAAATTGTTCTTGTTGCTATAGATCCCTTCTTGAAAATTATTGGAGACTTGTTGGAGTCTTGGCTTAATTGTTTATCAAGTAATGGAGGGCTCATTGGACTCTTCTTCAACTTTCTTAAAGGAGAGGTGATAACACCGGAAAAGTCATCGGCGGAGTTTTTATCGGTGGTTGGCCACCTTGACACAAGAGTTGATTTAGACAAAAATATTCATCATAAGGATATAAAGTACAAAGGGTTACTATCTATCATGGCTTCTAAATTTTCGTACGAGAATGAACAAGTCATTAGCAATGCAGTTACAAATCATTGGGGTATGGAATTTTTGGGGTTATACAGCTTTTGGAACGATTACCAAAAGATGGAGTCTACAAAGGCTATGATAGTGAAAGATACAAAGTCTGAACCAAACTTGATTGTGGTTGCATTTAGAGGTACAACTCCATTTGACGCTGTGCAATGGAAAACAGACGTTGATATCTCCTGGTATGACCTACCAAACGTGGGAAAGATGCATGGTGGATTCATGAAAGCTTTGGGACTATTAGAGAACGGTGGATGGCCCAAAGAAATTGATGAAAGAAGCCAACATCAATATGCTTACTACGCAATTAGAGAGCAACTGAGAGAAATGTTGAAGGAAAATAAGGATGCAAAATTCATATTAACAGGGCATAGTTTGGGTGGAGCATTGGCTATTCTGTTTGTCGCAATGCTTATATTCCATGAGGAAGAAGACATGTTGGATAAGTTACAAGGTGTTTATACATTTGGGCAACCAAGAGTAGGAGACGAGAAGTTTGGGGAGTTCATGAAAAGCAAGTTGAAAAAGTATGATGTGAAGTATTTTAGATATGTTTACTCTAATGATATGGTTCCAAGGGTCCCTTATGATGACAAATCCCTCTTCTTTAAGCACTTCAGTCCTAGTCTCTTTTTCAACAGCTTGTACCAAGGGCAGATTCTAGAGGAGGAGCCAAACAAGAACTATTTCTCTTTGTTCTGGGTGATACCCAAGATCTTAAACGCGGTTTGGGAGGTGATTAGAGGTTTCCTTCTACCAATTTTTCTAGGTAAAGAGTATAAACAGAATTGGTTCATGACGTTGTTCAGGCTTGTTGGATTGATAATTCCAGGACTACCAGCTCATTTCCCTACAGATTATGTCAATGCTACCCGATTGGGATCCTTAGACAAACACCTAGAGCTTCTAATATCTAAGGATGACTAA 1416 0.387 MGSEQQIHGDYLFLRPQEASVVELGSLLFSSNLANRSFIDCPQGLEARKFRQRWLLFTSVVAQIVLVAIDPFLKIIGDLLESWLNCLSSNGGLIGLFFNFLKGEVITPEKSSAEFLSVVGHLDTRVDLDKNIHHKDIKYKGLLSIMASKFSYENEQVISNAVTNHWGMEFLGLYSFWNDYQKMESTKAMIVKDTKSEPNLIVVAFRGTTPFDAVQWKTDVDISWYDLPNVGKMHGGFMKALGLLENGGWPKEIDERSQHQYAYYAIREQLREMLKENKDAKFILTGHSLGGALAILFVAMLIFHEEEDMLDKLQGVYTFGQPRVGDEKFGEFMKSKLKKYDVKYFRYVYSNDMVPRVPYDDKSLFFKHFSPSLFFNSLYQGQILEEEPNKNYFSLFWVIPKILNAVWEVIRGFLLPIFLGKEYKQNWFMTLFRLVGLIIPGLPAHFPTDYVNATRLGSLDKHLELLISKDD* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0500 471 Gene3D alpha/beta hydrolase 137 400 IPR029058 -
Mtr1g0500 471 SUPERFAMILY alpha/beta-Hydrolases 145 393 IPR029058 -
Mtr1g0500 471 Pfam Lipase (class 3) 202 361 IPR002921 GO:0006629
Mtr1g0500 471 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 3 463 IPR044819 GO:0004806|GO:0006629
Mtr1g0500 471 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 3 463 - -
Mtr1g0500 471 CDD Lipase_3 143 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0500 Mtr-Chr1 5831595 5834958 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0500 10 458 Acyl Lipid Metabolism Gene Families AT1G56630 54.176 2.09e-180 512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0500 1 5831595 5834958 Mtr1g0500 1 5831595 5834958 ECH