Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0491 ATGCTAGAAAAGCCAAACATGCATTCCCTGTTTCTCCCCAACACAAACGCAACAACGCTAACTTCTTCTCTTCTTTTCCTAAACACTAATAACAACTTCTCCTCAAAAGCCCGTTTCCAATGCTCAATCAAAGCCACCAACCCAAACACCAAACAAGTCACTAACAGTAACAAAAAGGTTATAATCCTATGGGACCTCGACAACAAACCACCACATGGACCACCATACAACGCCGCACTCTCTCTCAAAACCTTCGCCGAACGCTTCGGCGACGTCGTTTCAATCTCCGCTTACACAAAACGACACTCCTTCTTCAACCTCCCTCTATGGAACCCTAACCCTAACCCTAATTCCTTTCTCTGCCGTGTTTGTGGTTATGAATGCAGATCACTTACCGATGTCAACATTCACTTCAAGCGAGTTCATGAGTATCAAAAGAGAAAGACGCTGAATCGATTGAAATCTATTAAATTGAAACGTTCTAAGGTTAATTTCATAAGAAAGGTTCATAGGTATAATGAAGCTAAGAGCAATAATGCTCCACTTAAGGTTGGATTTGGAATGGCTTCGGAGTTGCGGAGAGGGGGTGTTTTTGTGAAGATTGTGACGGTTCGTGGTAAGGTGAAGGCTGCTGATTCTTCATTGAAGAGGGAAATGATGAGTGGTGGGGTTGATTCGTTGGTTTTGGTTTTGGTTTCGGATGACTCCGTGTTTTCGAAGATGTTGAGGAAAGTTAGGGAGGTGAAAGTAGAAACTGTTGTTGTTGGGGATTATTGGGGTAGGGATTTGGGGAGGAATGCTGATTTGTGGCTTCCTTGGATTCTTGTTGAGAATGGAAATGTTGAATATTTGATGGGAGGAACAGTGGAAGAGGATTTGGATGATGAATTGGAAGAAGATGAGAATATATATGATTATGATGATTATGATTATGATGATGATGGCTTTTATGTTTATTGA 960 0.4156 MLEKPNMHSLFLPNTNATTLTSSLLFLNTNNNFSSKARFQCSIKATNPNTKQVTNSNKKVIILWDLDNKPPHGPPYNAALSLKTFAERFGDVVSISAYTKRHSFFNLPLWNPNPNPNSFLCRVCGYECRSLTDVNIHFKRVHEYQKRKTLNRLKSIKLKRSKVNFIRKVHRYNEAKSNNAPLKVGFGMASELRRGGVFVKIVTVRGKVKAADSSLKREMMSGGVDSLVLVLVSDDSVFSKMLRKVREVKVETVVVGDYWGRDLGRNADLWLPWILVENGNVEYLMGGTVEEDLDDELEEDENIYDYDDYDYDDDGFYVY* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0491 319 ProSitePatterns Zinc finger C2H2 type domain signature. 121 142 IPR013087 -
Mtr1g0491 319 PANTHER OS06G0166200 PROTEIN 6 315 - -
Mtr1g0491 319 PANTHER - 6 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0491 Mtr-Chr1 5716764 5720000 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0491 57 281 C2H2 Transcription Factor Family AT5G52010 45.161 2.71e-63 204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0491 1 5716764 5720000 Mtr1g0491 1 5716764 5720000 ECH