Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0490 ATGAGTCAATGGATACATGTACATGTTGCTATTATAGCAGCCTTAGTTGGATGTATTTCAACCCTTTTGTTTGTTTTCATGTTGTGGTTTTGTCATCACAAAAAAGATCAAAAGAGATTTGTTGAATCAAATAGCTTGAACAAAAGAGAAAGCCAAGAAAGAAATTTTGATCAAAGAAGAAAGAGCAAAGGAAGAAAAGATTTGTTCAACTGGAATGATCATCCATATCTAGCTTCTGATGCTATAGAAAATGGATGGTCAAGATTTGCTTTCACTAGCTACATGAGTAATATTTCATCAAAAAAATCAACTTCATCAACACTATTAGGATCATGTGGAGGTAGTGATGAATTTGGAAGAGAAAATGAGGCTGAAATAAACTGGGAAGTTTGTCAAGGATCAAATGAATTCATGCAGAAGGTTAGACTCAATCCTGGTTTAAAAGAGTGTTTTTTTCATCCTAACAACACTTCTACAAGTGTTGCTTCTGTTATTAGGACTTCTCTGCCTCTTCCTGGTCCTTTTTTGGGGAACCATGCATTTCCACAAGAAGCTTATTTTGAAATCACTATACTGTATTCTTCTTGGAATGGAGATTATGAGTTGGTAGGAAGAAGAGAAGGGGAGAAGACAAAACTACTCATTGAAGATAGTTCAAATGATGAAGGTGATTTGAAAAGTGTTGAAGAAATGAAAGTTGAAGGAAAAAGTGGAATAAGTGAATCTGTGATGTTTTCATTGGGGTTAACAGGTGGAGGAGGTGTTCCTTTAAGGGTTCCAGGAACTTATCCTAGAAGCATAGGGTTCAACTCAAATGGTTCTGTGTTTCTTGATGGAATGAAACTTGTATTTGAGTCTGAGAAAGCACAATGGGTAGGAACTGATACAGTAATTGGTTGTGGATTTGATCCAAGGCAAAAGAAAGTTTTCTTCACATTAGACTCAGAATTGGTGCATGTAATCCACTGTCAATCAGAGGAATTCAGCACTCCATTATGTCCAACTTTGGCTGCAAATATAGACATTATGGTTTTAGTTAATTTTGGACAAATTGCATTCAAATATGCTCCTGCAAATGCACAAAGAACACCAAATCCATGCTTCATAGCACCACTTGTACATTCCCCTGGTGCTGCACTTGGATTTGATGACAGTAAGGAACTATTCTCCATGGGAAGGATTGATTCTCCGTGGCAGAATCGATCGGCAACAAAAGAAAATCACATCAATGTGAATAATAACAATCTAGCATTTGATTTTGATGAAGAGTCTGAAGCTGACTTATTTGAAATTGTGTTGGATGGTTCAGAAAAATCACCATACTCAGTGTCCTTATCATAG 1341 0.3639 MSQWIHVHVAIIAALVGCISTLLFVFMLWFCHHKKDQKRFVESNSLNKRESQERNFDQRRKSKGRKDLFNWNDHPYLASDAIENGWSRFAFTSYMSNISSKKSTSSTLLGSCGGSDEFGRENEAEINWEVCQGSNEFMQKVRLNPGLKECFFHPNNTSTSVASVIRTSLPLPGPFLGNHAFPQEAYFEITILYSSWNGDYELVGRREGEKTKLLIEDSSNDEGDLKSVEEMKVEGKSGISESVMFSLGLTGGGGVPLRVPGTYPRSIGFNSNGSVFLDGMKLVFESEKAQWVGTDTVIGCGFDPRQKKVFFTLDSELVHVIHCQSEEFSTPLCPTLAANIDIMVLVNFGQIAFKYAPANAQRTPNPCFIAPLVHSPGAALGFDDSKELFSMGRIDSPWQNRSATKENHINVNNNNLAFDFDEESEADLFEIVLDGSEKSPYSVSLS* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0490 446 PANTHER SPLA/RYANODINE RECEPTOR (SPRY) DOMAIN PROTEIN 3 442 - -
Mtr1g0490 446 Gene3D - 120 363 IPR043136 -
Mtr1g0490 446 PANTHER RAN BINDING PROTEIN 9-RELATED 3 442 - -
Mtr1g0490 446 CDD SPRY_RanBP_like 230 349 IPR044736 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0490 Mtr-Chr1 5711950 5714130 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0490 1 5711950 5714130 Mtr1g0490 1 5711950 5714130 ECH
Mtr1g0490 1 5711950 5714130 Mtr3g3662 3 50499649 50502290 PCT