Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0489 ATGGCTTCATCATTTATCAATTTCGTGAACACTACTATAGATTTAGTTACATATGCTTTACATGCTCCTTCTGCACGAGCTGTAGTTTTTGGATTCAATATTGGTGGACATTTGTTTATAGAAGTTTTGCTTTTGGTGGTTATACTTTTCTTGCTTTCTCAGAAAAGTTACAAGCCTCCTAAAAGACCCTTGTCAAACAAGGAAATTGATGAACTATGTGATGAATGGGTTCCACAACCCCTTATTCCTTCTCTTAATGACGAGATGCCCTATGAACCACCAGTGCTGGAAAGTGCTGCTGGGCCACATACCATAGTTAATGGTAAAGAAGTTGTAAATTTTGCTTCAGCAAACTATCTTGGGCTTATAGGTCATCAAAAGTTACTTGACTCATGTTCATCTGCTTTAGAGAAATATGGTGTTGGTTCTTGTGGTCCCCGTGGGTTTTATGGAACAATTGATGTCCATCTTGACTGTGAAGGGAGAATATCAAAGTTTTTAGGAACACCTGATTCAATTCTCTACTCTTATGGACTTTCCACCATGTTCAGTGCTATTCCTGCTTTCTCTAAAAAAGGCGATATAATTGTAGCGGATGAGGGAGTCCACTGGGGAATACAGAATGGCCTTTATCTTTCTAGAAGCACAGTGGTATATTTTAAGCACAATAACATGGATTCTTTAAGAGAAACTTTAGAGAACATTACTTCCATATATAAGAGGACCAAGAATTTGAGGCGTTATATTGTCATTGAAGCTCTCTACCAGAACTCTGGCCAAATAGCACCCTTAGATGAGATCATTAAATTGAAGGAAAAATATTGTTTTCGTATTTTACTGGATGAGAGCAACTCATTTGGTGTGCTTGGAAGTTCTGGAAGAGGTCTCACTGAACACTATGGAGTTCCAGTTGATAAGTTAGATCTTATAACTGCTGCTATGGGACATGCACTGGCCACAGAAGGAGGATTCTGCACGGGAAGTGCAAGAGTTATAGATCACCAACGATTGAGTAGCTCTGGCTATGTCTTTTCTGCTTCTTTACCTCCATATCTTGCAAGTGCTGCCATTACAGCTATTGACGTCCTTGAGGAAAATCCCAATCTATTAACAAAATTGAAGAACAATATTGATGTTTTATGGAAAGGGTTGTCGAAAATACTAGGCTTCACAATTGCAAGTCATCCAGAGTCGCCAATTGTTTATTTGAGATTAAAGAATTCAACGGGTTCTTTGAAAGATGACCTACATCTGCTTGAAAATATTGCCGAGCGTGTTTTGAAAGAAGATTCTGTATTTGTGGTGGCTTCCAGAAGATCGACATTGGACAAGTGTCGATTACCTGTTGGAATTAGATTATTTGTTTCTGCAGGGCATTCAGAGTCTGATCTTCACAAGGCATATGAGTCATTGAAAAGGGTTGCAGCATTAGTCCTTGATGGTCATAAATGA 1452 0.3877 MASSFINFVNTTIDLVTYALHAPSARAVVFGFNIGGHLFIEVLLLVVILFLLSQKSYKPPKRPLSNKEIDELCDEWVPQPLIPSLNDEMPYEPPVLESAAGPHTIVNGKEVVNFASANYLGLIGHQKLLDSCSSALEKYGVGSCGPRGFYGTIDVHLDCEGRISKFLGTPDSILYSYGLSTMFSAIPAFSKKGDIIVADEGVHWGIQNGLYLSRSTVVYFKHNNMDSLRETLENITSIYKRTKNLRRYIVIEALYQNSGQIAPLDEIIKLKEKYCFRILLDESNSFGVLGSSGRGLTEHYGVPVDKLDLITAAMGHALATEGGFCTGSARVIDHQRLSSSGYVFSASLPPYLASAAITAIDVLEENPNLLTKLKNNIDVLWKGLSKILGFTIASHPESPIVYLRLKNSTGSLKDDLHLLENIAERVLKEDSVFVVASRRSTLDKCRLPVGIRLFVSAGHSESDLHKAYESLKRVAALVLDGHK* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0489 483 Gene3D Aspartate Aminotransferase, domain 1 104 469 IPR015422 GO:0003824
Mtr1g0489 483 Gene3D - 125 366 IPR015421 GO:0003824
Mtr1g0489 483 PANTHER CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE 4 479 - -
Mtr1g0489 483 SUPERFAMILY PLP-dependent transferases 85 475 IPR015424 -
Mtr1g0489 483 Pfam Aminotransferase class I and II 110 471 IPR004839 GO:0009058|GO:0030170
Mtr1g0489 483 PANTHER LONG CHAIN BASE BIOSYNTHESIS PROTEIN 1-LIKE 4 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0489 Mtr-Chr1 5676003 5709219 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0489 1 335 Acyl Lipid Metabolism Gene Families AT4G36480 77.015 0.0 556