Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0488 ATGGAAGCAGGTGAAGATTGTTGTGTGAAAGTTGCGGTTCATGTGAGACCATTAATCAATGATGAGAAGCTTCAAGGTTGTAAAGATTGTGTAACTGTTGTTTCTGGGAAGCCTCAGGTGCAAATTGGTGCTCATTCCTTTACATTTGATCATGTTTATGGGAGCACTGGTTCTCCCTCATCTGCCATGTTTGATGAATGTGTTTCTTCCCTTGTTGGTGGTTTGTTCCAAGGATATAATGCTACTGTTCTTGCATATGGTCAGACAGGTTCTGGGAAAACATACACAATGGGAACTGGGTCTAAAGATGGTTATCAAGCAGGAATAGTACCCCAAGTTATGAGTTCCTTGTTTAGTAAAATTGAGACCTTAAAGAATCAGATTGAATTTCAGCTGCATGTGTCCTTTATCGAGATTCTTAAAGAAGAAGTAAGAGATTTGCTGGACCCGTCCTTTTTGAGCAAACCAGATACTACAAATGGACATACAGGGAAAGTGACTATTCCTGGTAAACCGCCTATACAAATTCGCGAGGCTTCAAATGGCGTCATTACTCTAGCGGGATCTACTGAAGTCAGTGTTGCAACATTAAAAGAAATGTCTGCTTGCCTAGAACAAGGATCATTGAGTAGAGCAACTGGGAGCACTAATATGAACAACCAATCCAGTCGTTCCCATGCCATCTTCACCATCACATTAGAGCAGATGCGGAAGCTCAACAATCCTAGTGAGATCAGTTTAAATGATACCATGAATGAAGATTATCTTTGTGCCAAGTTGCACTTGGTAGATCTTGCTGGATCAGAACGAGCTAAACGAACGGGTTCTGATGGTTTGCGTTTTAAGGAAGGAGTTCACATTAACAAAGGTCTACTAGCACTTGGCAATGTGATTAGTGCACTCGGTGATGAGAAAAAGAGAAAAGAAGGCGTTCATGTTCCTTATAGAGATAGTAAACTTACCAGGCTTTTGCAGGATTCACTTGGTGGTAACAGCAGAACTGTTATGATAGCCTGTATAAGTCCTGCTGACATTAATGCCGAGGAAACCCTCAACACTTTGAAGTATGCAAATCGTGCACGCAATATCCGAAATAAGCCTGTTGTCAATAGAGATCCAATGTCCAATGAGATGCTTAAAATGCGACAACAACTAGAGACTTTGCAAGCAGAACTTTGTGCTCGTTCTGGTGGCTCTTCTGATGAAGTTCAGGTCCTCAAGGAAAGAATTTCTTGGCTTGAAGCAGCTAATGAGGATCTTTGCCGCGAACTTCATGAATATCGTAGTAGATGCTCTGGTGCAGTACAAAGTGAAAAGGATGCTTATGACGGTAGCATGTACAATGTAAAGACTGATGGGCTTAAAAGGGGCTTACCTTTCACAGCCCCCGACTATCCAACGAGTGAAGCAACGGGGGATTCAAGGGAAATTGAAGAAGTAGCAAAAGAGTGGGAGCATACACTTCTGCAAAACAGTATGGATAGGGAGTTACATGAATTGAATAAACGCTTGGAGCAGAAAGAGTCTGAGATGAAGCTTTTTGGATCATCTGATCCTGAAACACTCAAGCAGCACTTTGGAAGGAAGATCATGGAACTTGAGGATGAGAAGAGAACTGTCCAGCAAGACAGGGATCGTCTTTTGGCTGAAGTTGAAAATCTTGCTGCCGGTTCTGACGGACAAACACACAAATCAGAGGATATCCATGCCCAAAAATTAAAAGCACTTGAAGCTCAGATTCTGGATATGAAGAAGAAACAAGATAGCCAGGTTCAGCTTCTAAAGCAAAAGCAAAAAAGTGATGAAGCAGCAAAGCGCCTTCAAGATGAAATACAATCTATAAAAGCCCAAAAGGTTCAATTGCAACAAAGGATAAAACAAGAGGCAGAACAATTTCGGCAGTGGAAGGCCTCTAGAGAGAAAGAGCTGCTGCAATTAAAGAAAGAAGGAAGAAGAAACGAATTTGAAAGGCATAAGCTGCAAGCTCTAAATCAGCGTCAGAAAATGGTCCTTCAGAGAAAAACCGAGGAAGCTGCAATGGCCACCAAGAAGTTAAAGGAATTGTTAGAAGCTCGTAAATCTTCTAACCGAGATGCATCAGTTACAGTGAATGGGAGTGGAACAACTAAACAGAGCAATGAGAAGTCCTTGCAACGGTGGGTTGATCACGAGCTAGAAGTCATGGTAAAAGAGCATGAAGTTCGTTTTGAGTATGAGAAGCAGAGCCAAGTGCGGGCTGCTCTTGGAGAGGAGTTAGCCATGCTGAAACAAGTAAACGAATTTGCTGCCAGTGGTCTTAGTCCTCCAAAAGGGAAGAACGGATTTGCTAGAGCATTCTCCATGTCGCTAAATGCTAGAATGGCCAGAATAGCTTCGCTAGAGAACATGCTGAGCATATCATCTAATTCACTTGTGGCAATGGCTTCTCAACTATCTGAGGCAGAAGAACGAGAACGGGCCTTTACTAACCGTGGACACTGGAACCAGTTGCGCTCAATGGGAGAAGCCAAAATTTTGCTTCAATATATGTTCAATTCTCTTGCAGACACGAGGTGTCAAATGTGGGAGAAGGATATGGAGATGAGAGAAATGAAAGATCAAATCAGAGAACTTGTAGGTCTACTACGGCAAAGCGAGATCAAGAGGAAGGAAGTTGAGAAGGAACTAAAAGTGAGAGAGCTAGATGATGCAACCACATTGGCCAAGCCAGTTTCGGGAAACTCTCCAAATTCATTGAAACACTCTGTAGACGACATCAAGGAACCTTTATCTCCGGATCCTGTGCCAGCATCAAAACAGCGCAAATATACACCAGGCATTGCTAATGGCCAAGTGAGGGAATCAGCTGCATTTATAGATCAAAGTAGAAAGATGGTACCCATTGGGCAATTGTCAATGAAAAAACTAGCAGTTGCAGGACAAGCTTCTGGCAAGCTATGGAGGTGGAAAAGGAGCCATCATCAGTGGCTAATACAATTCAAATGGAAGTGGCAGAAACCATGGAAACTTTCTGAACGGATTCGACACAGTGATGAGACGATGATGAGAGCAAGGCCACGTTCACATACTTTGCCTCAAATCAAGTGA 3087 0.4266 MEAGEDCCVKVAVHVRPLINDEKLQGCKDCVTVVSGKPQVQIGAHSFTFDHVYGSTGSPSSAMFDECVSSLVGGLFQGYNATVLAYGQTGSGKTYTMGTGSKDGYQAGIVPQVMSSLFSKIETLKNQIEFQLHVSFIEILKEEVRDLLDPSFLSKPDTTNGHTGKVTIPGKPPIQIREASNGVITLAGSTEVSVATLKEMSACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLNNPSEISLNDTMNEDYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIRNKPVVNRDPMSNEMLKMRQQLETLQAELCARSGGSSDEVQVLKERISWLEAANEDLCRELHEYRSRCSGAVQSEKDAYDGSMYNVKTDGLKRGLPFTAPDYPTSEATGDSREIEEVAKEWEHTLLQNSMDRELHELNKRLEQKESEMKLFGSSDPETLKQHFGRKIMELEDEKRTVQQDRDRLLAEVENLAAGSDGQTHKSEDIHAQKLKALEAQILDMKKKQDSQVQLLKQKQKSDEAAKRLQDEIQSIKAQKVQLQQRIKQEAEQFRQWKASREKELLQLKKEGRRNEFERHKLQALNQRQKMVLQRKTEEAAMATKKLKELLEARKSSNRDASVTVNGSGTTKQSNEKSLQRWVDHELEVMVKEHEVRFEYEKQSQVRAALGEELAMLKQVNEFAASGLSPPKGKNGFARAFSMSLNARMARIASLENMLSISSNSLVAMASQLSEAEERERAFTNRGHWNQLRSMGEAKILLQYMFNSLADTRCQMWEKDMEMREMKDQIRELVGLLRQSEIKRKEVEKELKVRELDDATTLAKPVSGNSPNSLKHSVDDIKEPLSPDPVPASKQRKYTPGIANGQVRESAAFIDQSRKMVPIGQLSMKKLAVAGQASGKLWRWKRSHHQWLIQFKWKWQKPWKLSERIRHSDETMMRARPRSHTLPQIK* 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0488 1028 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 394 IPR027417 -
Mtr1g0488 1028 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-LIKE PROTEIN 2 1027 - -
Mtr1g0488 1028 Coils Coil 403 423 - -
Mtr1g0488 1028 ProSiteProfiles Kinesin motor domain profile. 8 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr1g0488 1028 SMART kinesin_4 6 371 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr1g0488 1028 MobiDBLite consensus disorder prediction 692 716 - -
Mtr1g0488 1028 MobiDBLite consensus disorder prediction 900 936 - -
Mtr1g0488 1028 Coils Coil 861 895 - -
Mtr1g0488 1028 MobiDBLite consensus disorder prediction 695 715 - -
Mtr1g0488 1028 Coils Coil 590 638 - -
Mtr1g0488 1028 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 2 1027 - -
Mtr1g0488 1028 CDD KISc_KIF4 7 364 - -
Mtr1g0488 1028 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr1g0488 1028 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr1g0488 1028 PRINTS Kinesin heavy chain signature 259 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr1g0488 1028 PRINTS Kinesin heavy chain signature 313 334 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr1g0488 1028 Coils Coil 530 550 - -
Mtr1g0488 1028 Gene3D Kinesin motor domain 2 392 IPR036961 -
Mtr1g0488 1028 Coils Coil 490 510 - -
Mtr1g0488 1028 Coils Coil 671 691 - -
Mtr1g0488 1028 Pfam Kinesin motor domain 15 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr1g0488 1028 ProSitePatterns Kinesin motor domain signature. 258 269 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0488 Mtr-Chr1 5639948 5650744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0488 9 389 Miscellaneous Gene Families AT5G06670 36.573 2.05e-52 195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0488 1 5639948 5650744 Mtr1g0488 1 5639948 5650744 ECH
Mtr1g0488 1 5639948 5650744 Mtr3g3664 3 50530721 50542890 PCT