Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0486 ATGATGAGTAGCATCTTTGCAAAATTATTGTTCTCAACTTTGTGCATGCTCTTTGTGCTCAAAGCAGAATCTTTGGTATTTGCAGACCAAAGACTTGCTATAGTGTATCCAGTGATACAAAAATTCAAGTCCTTGATTACTTCAGATCCATTAGGTGTTACAAAATCATGGATAGGTTCTGATATATGCAACTACAAAGGATTCTACTGTGATCATCCACCAGATAACAACTCTGCTATTGCTTTAGCTTCAATTGATTTCAATGGTTTTCAACTAAGTGCTTCTACTCTTAATGGTTTTATTGATAAACTTCCTGATATTGCTCTTTTTCATGCAAATTCCAACAATTTCATTGGCACAATCACTTCTCAAATTTCTAAACTTCCTTATCTTTATGAGCTTGATTTAAGTAATAACAAATTTTCTGGTCCTTTTCCTATGGCTGTTCTAGGCATGAACACTTTAACATTCTTGGATATAAGGTTCAATTCTTTCTCTGGCGGGGTCCCACAACAGATATTCACACAAAACCTTGAAGTACTTTTTATCAATAACAATCTCTTGACACAAAACTTGCCTGATAATTTAGCCACAAGTTCAATTTTTCTACTCACTTTGGCTAACAATAAATTCATCGGTTCAATACCGAGAAATCTTCCGAAAGCTTTGTCGAGTTTAACTGAGGTGGTTTTACTAAACAATGAGTTAACAGGTTGTTTACCTCATGAAATTGGTTATTTTCAAGAAGCTGTAGTTTTTGATGTTGGAAATAATCAACTTACTGGTCCTTTACCAATGTCTCTTAGTTGTCTTGAGAAAGTTGAGGTTGTTAATTTGGCTGGTAACATGTTTTATGGAATGGTGCCTGATTTTGTGTGTGCAGGGTTGGAGAATTTGGTGAATTTTTCACTGTCAGATAACTATTTTACTCATGTGGGACCTTTTTGTAGGATGTTGATTCAAAGAGGTGTTCTTGATGTTGGGAAGAATTGTATTCATGATCTTCCTTTTCAGAGATCATTGATTGAGTGTGCTGATTTCTTTACACGGCCAAAGATTTGTCCATTTACTTGGTTTCATGGTTTTTATCCTTGTAATTTTCCTTTTAAAAAATCATCAGTTTCTTCTATTCCTTAG 1137 0.3448 MMSSIFAKLLFSTLCMLFVLKAESLVFADQRLAIVYPVIQKFKSLITSDPLGVTKSWIGSDICNYKGFYCDHPPDNNSAIALASIDFNGFQLSASTLNGFIDKLPDIALFHANSNNFIGTITSQISKLPYLYELDLSNNKFSGPFPMAVLGMNTLTFLDIRFNSFSGGVPQQIFTQNLEVLFINNNLLTQNLPDNLATSSIFLLTLANNKFIGSIPRNLPKALSSLTEVVLLNNELTGCLPHEIGYFQEAVVFDVGNNQLTGPLPMSLSCLEKVEVVNLAGNMFYGMVPDFVCAGLENLVNFSLSDNYFTHVGPFCRMLIQRGVLDVGKNCIHDLPFQRSLIECADFFTRPKICPFTWFHGFYPCNFPFKKSSVSSIP* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0486 378 PANTHER BNAA09G53810D PROTEIN 20 377 - -
Mtr1g0486 378 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 20 377 - -
Mtr1g0486 378 Gene3D Ribonuclease Inhibitor 202 344 IPR032675 -
Mtr1g0486 378 Gene3D Ribonuclease Inhibitor 37 201 IPR032675 -
Mtr1g0486 378 SUPERFAMILY L domain-like 38 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0486 Mtr-Chr1 5628270 5629730 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0486 24 353 Leucine-rich Repeat extension Gene Families AT3G24480 42.121 2.45e-84 263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0486 1 5628270 5629730 Mtr1g0486 1 5628270 5629730 ECH