Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0482 ATGGGCCAAGCAGCTTCCACGGTCACCGGAACCAACCGCCGGGAAAGCGCAGGCAACCGATCTACGAAAACCACCAGATCCACCGCCTTGGTTTCTCCGATGATCTCCACCGACGACGGCGACGATGTTGCAGATCCGGTTGACGGCGACGGTAACGATGGAATCGGAAACTCCGATTATATATCAGATCTACCTGATGAGTGTTTAGCGATTGTGTTTCAGTCGCTGAATCCCTCTGATCGGAATCAGTGTTCACTCGTTTGCCGGCGGTGGCTTCACGTTGAAGGACAGAGTCGTCAACGGCTTTCGTTGAACGCAAAGCTCGATCTTCTTCCGGTAATTCCTTCCCTGTTTAATCGATTTGATTCAGTGACGAAATTAGCGTTGAAGTGTGATCGTAGATCTGTGAGTATTAGAGATGAAGCGCTTGTTATAATCTCTGAGCGTTGTCCTAATCTCACGCGCCTTAAGCTCCGCGCGTGTCGTGAACTTACGGATGCAGGAATGGAAGCTTTTGCTAAGAATTGCAAGGGTTTGAGGAAATTATCGTGTGGATCTTGTACTTTTGGATCTAAAGGTATGAACGCCGTGCTTGAAAACTGCGCCGCACTGGAGGAATTGTCGGTGAAAAGGCTTAGGGGAATTGCGGAGACTGCTGTGGCTGAGCCGATTGGACCGGGTGTGGCCGCGGCGTCGTTGAAGACGATTTGTTTGAAGGAGCTTTATAATGGACAGTGTTTTGGTTCGTTGATTTTAGGTGCTAAGAATTTGAAGACTTTGAAGCTTTTTCGATGTTCGGGTGATTGGGATACGCTTTTTACACTTATGGCGGAAAGAGTGGCGAGTATGATTGTTGAGGTTCATTTTGAGAGGCTTCAGATTAGTGATATTGGCTTGCAAGCTATTTCGAATTGTTCAAATTTGGAGATTTTGCATCTTGTTAAGACACCTGAGTGTACTGATATGGGACTTGTTGCGATAGCTGAAAGATGCAAGTTGTTAAGGAAGCTACATATTGATGGATGGAAGGCAAATCGGATTGGCGATGAAGGGTTAATTGCGGTTGCAAAGTTTTGCCCTAATTTGCAAGAATTGGTGCTTATTGGTGTTAACCCTACGAGAGTGAGTTTGGAAATGTTGGCATCGAATTGCCCGAATCTAGAGAGATTGGCTTTGTGTGCAAGTGATACTGTTGGTGATCCTGAGATATCTTGCATTGCTGCAAAGTGTTTGGCTTTGAAGAAACTTTGCATCAAGAGTTGTCCTGTTTCTGATCTTGGGATGGAAGCTTTGGCAAATGGTTGTCCCAATTTGGTGAAAGTGAAGGTTAAGAAGTGTAAGGGTGTTACCCCTGAAGGTGGGGATTGGTTGAGGCACACTAGGGTTTCTGTTGCTGTTAACTTGGATGCGGTCGAAGCAGAACTTCAAGATGCTAGTGCTAGTGATGGTGGAGCACAAGACAATGGGATTGAATTTCCTTCAATGCCTGGCTCCGCAGCATCTACATCGGCAAATATTGCATCGAGAAGTACTGTTCGATCAAGTTCGTTCAAGCAAAGGTTAGGGCTATTGTCCGGGAGGAAAATTGTAGCTAGCACTTTGAGAAGATGGTCAGGTGGTAGCACTAGTGCCCGCCATGGTTAG 1644 0.4635 MGQAASTVTGTNRRESAGNRSTKTTRSTALVSPMISTDDGDDVADPVDGDGNDGIGNSDYISDLPDECLAIVFQSLNPSDRNQCSLVCRRWLHVEGQSRQRLSLNAKLDLLPVIPSLFNRFDSVTKLALKCDRRSVSIRDEALVIISERCPNLTRLKLRACRELTDAGMEAFAKNCKGLRKLSCGSCTFGSKGMNAVLENCAALEELSVKRLRGIAETAVAEPIGPGVAAASLKTICLKELYNGQCFGSLILGAKNLKTLKLFRCSGDWDTLFTLMAERVASMIVEVHFERLQISDIGLQAISNCSNLEILHLVKTPECTDMGLVAIAERCKLLRKLHIDGWKANRIGDEGLIAVAKFCPNLQELVLIGVNPTRVSLEMLASNCPNLERLALCASDTVGDPEISCIAAKCLALKKLCIKSCPVSDLGMEALANGCPNLVKVKVKKCKGVTPEGGDWLRHTRVSVAVNLDAVEAELQDASASDGGAQDNGIEFPSMPGSAASTSANIASRSTVRSSSFKQRLGLLSGRKIVASTLRRWSGGSTSARHG* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0482 547 MobiDBLite consensus disorder prediction 1 56 - -
Mtr1g0482 547 Gene3D Ribonuclease Inhibitor 105 482 IPR032675 -
Mtr1g0482 547 ProSiteProfiles F-box domain profile. 58 91 IPR001810 GO:0005515
Mtr1g0482 547 PANTHER UNCHARACTERIZED 46 472 - -
Mtr1g0482 547 Pfam Leucine Rich repeat 150 173 IPR001611 GO:0005515
Mtr1g0482 547 SUPERFAMILY F-box domain 50 94 IPR036047 GO:0005515
Mtr1g0482 547 SMART LRR_CC_2 384 409 IPR006553 -
Mtr1g0482 547 SMART LRR_CC_2 435 467 IPR006553 -
Mtr1g0482 547 SMART LRR_CC_2 305 330 IPR006553 -
Mtr1g0482 547 SMART LRR_CC_2 150 175 IPR006553 -
Mtr1g0482 547 SMART LRR_CC_2 410 434 IPR006553 -
Mtr1g0482 547 SMART LRR_CC_2 331 358 IPR006553 -
Mtr1g0482 547 SMART LRR_CC_2 176 200 IPR006553 -
Mtr1g0482 547 SMART LRR_CC_2 359 383 IPR006553 -
Mtr1g0482 547 Gene3D - 60 99 - -
Mtr1g0482 547 Pfam F-box domain 61 92 IPR001810 GO:0005515
Mtr1g0482 547 PANTHER F-BOX PROTEIN SKIP2 46 472 - -
Mtr1g0482 547 MobiDBLite consensus disorder prediction 1 34 - -
Mtr1g0482 547 SUPERFAMILY RNI-like 111 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0482 Mtr-Chr1 5569472 5571707 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0482 1 5569472 5571707 Mtr1g0482 1 5569472 5571707 ECH