Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0481 ATGGGTGGTTGGGCAATTGCTGTGCATGGTGGTGCTGGTGTTGACCCTAATCTCCCTCTTCAACGTCAAGAAGAAGCCAAACAACTTCTTACTCGTGTTCTCAATCTTGGCATCTCTGCTCTTCGTTCCAATCTTTCTGCCATCGATGTTGTTGAACTTGTGGTGAGGGAATTGGAAACGGATCCACTATTCAATTCGGGTCGTGGATCTGCCCTGACGGAAAAAGGAACGGTGGAAATGGAGGCTAGCATAATGGATGGACCAAAAAGACGATGCGGTGCCGTTTCAGGTTTAACCACGGTAAAAAATCCAATTTCACTGGCTCGTTTAGTCATGGATAAATCTCCTCATTCCTATCTTGCTTTTAACGGCGCTGAAGATTTTGCTAGGCAACAGGGTGTGGAGGTTTTGGACAATGAGTACTTTATCACTGCTGACAATGTTGGTATGCTTAAGCTGGCAAAGGAAGCAAATACAATCTTGTTTGATTATCGGATTCCATCTGGATACGAAACATGTGGTGCAGCAGTTGAAAGTCCAATGAAAATGAATGGACTTCCAATGAGTGTCTACGCACCTGAAACAGTCGGGTGCGTAGTGGTGGACCGTGAAGGAAGATGTGCTGCTGCCACGTCAACAGGCGGGCTAATGAACAAGATGATTGGTCGGATTGGTGACTCACCTTTGATAGGAGCTGGGACCTACGCGTGTAACCTAGCTGGCGTATCATGCACCGGTGAAGGCGAGGCTATCATACGTGGCACTTTGGCGCGTGAGGTGTCGGCTGTGATGGAATACAAAGGTCTTGGTCTTCAAGAAGCAGTGGATTTCGTCATTAAGAATCGTTTGGATGAAGGATATGCTGGACTCATTGCTGTTTCTAGTAAAGGAGAAGTTGCTTATGGATTTAACTGCAATGGCATGTTTAGGGGTTGTGCTTCTGAGGATGGATTCATGGAGGTTGGAATTTGGGAGTAA 978 0.4642 MGGWAIAVHGGAGVDPNLPLQRQEEAKQLLTRVLNLGISALRSNLSAIDVVELVVRELETDPLFNSGRGSALTEKGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMDKSPHSYLAFNGAEDFARQQGVEVLDNEYFITADNVGMLKLAKEANTILFDYRIPSGYETCGAAVESPMKMNGLPMSVYAPETVGCVVVDREGRCAAATSTGGLMNKMIGRIGDSPLIGAGTYACNLAGVSCTGEGEAIIRGTLAREVSAVMEYKGLGLQEAVDFVIKNRLDEGYAGLIAVSSKGEVAYGFNCNGMFRGCASEDGFMEVGIWE* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0481 325 Gene3D (Glycosyl)asparaginase 195 325 - -
Mtr1g0481 325 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 322 IPR029055 -
Mtr1g0481 325 CDD Asparaginase_2 5 317 - -
Mtr1g0481 325 PANTHER L-ASPARAGINASE 1 325 IPR000246 GO:0016787
Mtr1g0481 325 PANTHER PEPTIDASE T2, ASPARAGINASE 2, NUCLEOPHILE AMINOHYDROLASE-RELATED 1 325 - -
Mtr1g0481 325 Pfam Asparaginase 4 324 IPR000246 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0481 Mtr-Chr1 5536303 5538625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0481 6 285 Miscellaneous Gene Families AT4G00590 27.063 7.69e-18 81.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0481 1 5536303 5538625 Mtr1g0481 1 5536303 5538625 ECH
Mtr1g0481 1 5536303 5538625 Mtr3g3673 3 50622542 50624336 PCT