Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0479 ATGTCCGACCCGGAAACCAAACCCGAACAAGACTCCACCCTCGCTCCACCGCAACAACCAAATTTCACCGGAAACTACTCTATTTGGCCTCCCAAACAACGCACTCGCGACGCCGTCAAAAACCGTTTGATCGAAACACTTTCCACTCCCTCAGTCCTCACCAAACGCTACGGCACAATGTCCGCTGACGAAGCCTCCGCCGCCGCTATCCAGATCGAGGACGAAGCTTTCTCCGTCGCCAATGCTTCCTCTTCAACTAGCAACGATAACGTTACGATTCTTGAGGTTTACTCGAAGGAGATCAGTAAGCGCATGATCGAGACTGTTAAAGCTAAATCTCGTCTCGCTGATGACGGTAACACCTCCGTCGGAACTCCTTCCTCCGCCGCAGACGCAGTTGCTGTTTTGAGTCTTGATTGA 420 0.5214 MSDPETKPEQDSTLAPPQQPNFTGNYSIWPPKQRTRDAVKNRLIETLSTPSVLTKRYGTMSADEASAAAIQIEDEAFSVANASSSTSNDNVTILEVYSKEISKRMIETVKAKSRLADDGNTSVGTPSSAADAVAVLSLD* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0479 139 MobiDBLite consensus disorder prediction 7 30 - -
Mtr1g0479 139 Gene3D WPP domain 25 120 IPR038214 -
Mtr1g0479 139 PANTHER WPP DOMAIN-CONTAINING PROTEIN 1-RELATED 6 130 - -
Mtr1g0479 139 PANTHER WPP DOMAIN-CONTAINING PROTEIN 1-RELATED 6 130 IPR044692 GO:0000278|GO:0048527
Mtr1g0479 139 Pfam WPP domain 27 117 IPR025265 -
Mtr1g0479 139 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0479 Mtr-Chr1 5510385 5511110 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0479 1 5510385 5511110 Mtr1g0479 1 5510385 5511110 ECH
Mtr1g0479 1 5510385 5511110 Mtr3g3681 3 50693221 50694165 PCT