Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0470 ATGGCGTCAAGTTTTGATCGGTGGGAAAAAGATCCATTTTTTAGTGCTGCCGAAGAAGTTCAGGAATCTGCAGATAGGATGGAATCTACATATAGGACATGGATACATGCCACCAAAGATACTTCTAGCATGTGGAACCCTAATGAACTCCGAAGAGATTTACTTACTACCCTTGGCACTGCTAAATGGCAGTTAGAGGAATTTGAACGCGAGGTTAGGTTAAGTTATAGCAGAAACTTGGGTGATGATGCAAGAACTAGGCATCGAGATTTTATCACTGCTATTGAGGAGAAGATAAAAAAAGTTGAGCATGCGTTAGATGAAACGAACCCTCCGGGTAGAAAGGCATCTCAGACATGGGTGATTTTGGACGAAGGAGAAAAAGACGAGCTCGCTTTGTTTCTTTCGGGAATGCCGGCAACTGAAAGCAACAATCCACGATTATATAATAAAAATTCAGTTGCATCTGGTGTTGGGGAAGAAAAGGAGGAGGTATCACGTGGGCATCGTCGGGCAGCTAGTGCTAGTGCTGATATTGGTTTTTGGAAAATTTCAGTTTCTGATGATCCGCAGCAGTCTAGTTCCTCTAGCGGTTCTTCTGGTCCAAATCCAATGCATAAAGTGCCAAGTTTATCAGGATTTCTTAGTTCCGTGGAATCAATTTCGAAATTGAAGTGGCCGAGGAATGGTTATAGAAAACTGAAAACAGTGGATCATCATAAAGAAACTGATAGTGCACTAATTCCAATGGCTGAATTGAATAGGGGAAACAATGCATGCTACGAAAGAAGTAAAAGTAGCCTCGATAGTTCTGATGAATGCTATGACAAGCATCTCTATGGATGGTGTGGTGCTATTCAGAGACAGCTTCAAAGATCTCAATACCAAATGCAATACAGTCGGCCTGTTCGAATAATCGTTTCGATTGTTTTTCTCCTTTGCTTGATTGTTTTAATTACACTTCACACGAGGTAG 975 0.4144 MASSFDRWEKDPFFSAAEEVQESADRMESTYRTWIHATKDTSSMWNPNELRRDLLTTLGTAKWQLEEFEREVRLSYSRNLGDDARTRHRDFITAIEEKIKKVEHALDETNPPGRKASQTWVILDEGEKDELALFLSGMPATESNNPRLYNKNSVASGVGEEKEEVSRGHRRAASASADIGFWKISVSDDPQQSSSSSGSSGPNPMHKVPSLSGFLSSVESISKLKWPRNGYRKLKTVDHHKETDSALIPMAELNRGNNACYERSKSSLDSSDECYDKHLYGWCGAIQRQLQRSQYQMQYSRPVRIIVSIVFLLCLIVLITLHTR* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0470 324 MobiDBLite consensus disorder prediction 144 172 - -
Mtr1g0470 324 PANTHER OS05G0443700 PROTEIN 1 321 - -
Mtr1g0470 324 MobiDBLite consensus disorder prediction 157 171 - -
Mtr1g0470 324 Gene3D - 9 109 - -
Mtr1g0470 324 MobiDBLite consensus disorder prediction 187 209 - -
Mtr1g0470 324 Pfam Syntaxin 6, N-terminal 11 103 IPR015260 GO:0016020|GO:0048193
Mtr1g0470 324 PANTHER EXPRESSED PROTEIN 1 321 - -
Mtr1g0470 324 MobiDBLite consensus disorder prediction 187 206 - -
Mtr1g0470 324 SUPERFAMILY t-snare proteins 10 108 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0470 Mtr-Chr1 5442334 5444864 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0470 1 5442334 5444864 Mtr1g0470 1 5442334 5444864 ECH
Mtr1g0470 1 5442334 5444864 Mtr3g3700 3 50811755 50815361 PCT