Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0469 ATGATGCAGATTCTCAAGTCTCTTCAAATTGTTCTGCTGCTAATATTCTGCAGTAGACACATAACAGCACAAACCAAAAACACATACATAATTCACATGGACAAATCCACCATGCCAGAAACATTCACTGATCACCTTAACTGGTTCGATACATCGCTAAAATCAGTATCAGAAACAGCAGAGATTCTATACACATACAAACACATAGCTCATGGATACTCCACAAGACTAACTAACCAAGAAGCCGAAACACTTTCAAAACAGCCCGGAATTCTCGATGTTATACCTGAACTCAGATACCAACTTCACACAACAAGAACACCACAGTTCCTTGGTTTGCCAAAAACAAACACTCTTTTACCTCACTCTAGACAACAAAGTCAAGTAATCATTGGTATTCTTGACACTGGTATATGGCCAGAGCTAAAAAGCTTAGATGACACAGGACTAGGTCCAATACCAAGTAATTGGAAAGGTGTATGTGAAACTGGTAACAACATGAATTCATCACACTGCAACAAAAAACTCATAGGTGCAAGGTTTTTCTTAAAAGGGTATGAAGCAGCACTTGGTCCAATAGATGAAACAACAGAATCAAAATCAGCTAGAGATGATGATGGACATGGAAGTCACACATTAACAACAGCAGCAGGTTCTGTTGTAGCAGAAGCTAGCTTATTTGGTTTAGCTTCTGGTACAGCAAGAGGCATGGCTACTGAAGCGCGTGTCGCAGCTTACAAGGTGTGCTGGCTTAGTGGTTGTTTCACTTCAGACATAGCTGCTGGAATGGATAAAGCTATAGAAGATGGTGTTAACATCTTATCTATGTCAATTGGTGGTAGCATAATGGATTACTACAGAGACATAATTGCAATTGGTGCTTTCACAGCAATGTCTCATGGAATTCTAGTTTCATCTTCAGCAGGAAATGGTGGACCAAGTGCTGAAAGCTTGTCAAATGTAGCACCATGGATAACAACTGTTGGTGCCGGAACAATTGACCGCGATTTTCCTAGTTATATAACACTTGGAAATGGAAAAACTTACACTGGTGCATCACTTTACAATGGAAAACCTTCATCTGATTCATTGCTTCCAGTTGTTTATGCAGGAAATGTTAGTGAATCCTCAGTTGGGTATCTTTGTATACCTGATTCTTTAACAAGTTCAAAAGTTTTAGGTAAAATTGTGATATGTGAAAGAGGTGGAAACTCAAGAGTTGAAAAGGGTCTTGTTGTAAAAAATGCTGGTGGAGTTGGAATGATTTTGGTAAACAATGAAGCATATGGTGAAGAGTTAATTGCTGATTCTCATCTTCTACCAGCAGCAGCATTGGGTCAAAAATCAAGCACTGTTTTAAAAGACTACGTTTTTACTACGAAAAATCCAAGAGCTAAACTTGTTTTTGGGGGCACACACTTACAAGTTCAACCTTCACCAGTGGTAGCAGCATTCAGTTCAAGAGGACCAAATAGTTTAACACCAAAGATTCTCAAACCGGATTTAATAGCTCCAGGTGTAAACATTTTAGCCGGTTGGACCGGTGCAGTTGGTCCAACCGGCTTAGCTCTTGATAAGAGGCACGTGAATTTCAACATTATATCGGGAACTTCCATGTCATGTCCTCACGCGAGTGGTTTAGCTGCTATAGTTAAAGGTGCTTACCCCGAATGGAGCCCTGCTGCTATACGGTCAGCACTAATGACCACAGCATACACCTCGTACAAAAATGGACAAACAATTGTAGATGTTGCAACCGGGAAACCGGCTACTCCCTTTGATTTTGGATCCGGACACGTGGATCCTGTATCTGCCCTTGATCCTGGTCTTGTTTATGACATCAACGTCGATGACTATCTTGGATTTTTTTGTGCCTTAAACTACACGTCATATCAGATCAAACTGGCTGCAAGGAGAGAGTTTACTTGTGATGCAAGGAAGAAATACAGGGTTGAAGATTTTAACTATCCTTCTTTTGCTGTTGCTTTGGAAACTGCTTCGGGAATTGGTGGTGGTTCAAATAAACCGATAATTGTTGAATACAATAGGGTTCTTACGAATGTGGGAGCTCCAGGAACGTATAATGCTACGGTGGTGTTGTCATCGGTAGATTCTTCGTCGGTGAAGGTTGTTGTGGAACCAGAGACTATTAGTTTTAAGGAGGTGTATGAGAAGAAGGGTTATAAAGTGAGGTTCATTTGTGGCTCAATGCCTTCTGGAACTAAGAGTTTCGGTTATTTGGAATGGAATGATGGGAAGCATAAGGTTGGGAGTCCAATTGCATTTAGTTGGACTTGA 2298 0.4064 MMQILKSLQIVLLLIFCSRHITAQTKNTYIIHMDKSTMPETFTDHLNWFDTSLKSVSETAEILYTYKHIAHGYSTRLTNQEAETLSKQPGILDVIPELRYQLHTTRTPQFLGLPKTNTLLPHSRQQSQVIIGILDTGIWPELKSLDDTGLGPIPSNWKGVCETGNNMNSSHCNKKLIGARFFLKGYEAALGPIDETTESKSARDDDGHGSHTLTTAAGSVVAEASLFGLASGTARGMATEARVAAYKVCWLSGCFTSDIAAGMDKAIEDGVNILSMSIGGSIMDYYRDIIAIGAFTAMSHGILVSSSAGNGGPSAESLSNVAPWITTVGAGTIDRDFPSYITLGNGKTYTGASLYNGKPSSDSLLPVVYAGNVSESSVGYLCIPDSLTSSKVLGKIVICERGGNSRVEKGLVVKNAGGVGMILVNNEAYGEELIADSHLLPAAALGQKSSTVLKDYVFTTKNPRAKLVFGGTHLQVQPSPVVAAFSSRGPNSLTPKILKPDLIAPGVNILAGWTGAVGPTGLALDKRHVNFNIISGTSMSCPHASGLAAIVKGAYPEWSPAAIRSALMTTAYTSYKNGQTIVDVATGKPATPFDFGSGHVDPVSALDPGLVYDINVDDYLGFFCALNYTSYQIKLAARREFTCDARKKYRVEDFNYPSFAVALETASGIGGGSNKPIIVEYNRVLTNVGAPGTYNATVVLSSVDSSSVKVVVEPETISFKEVYEKKGYKVRFICGSMPSGTKSFGYLEWNDGKHKVGSPIAFSWT* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0469 765 ProSitePatterns Serine proteases, subtilase family, serine active site. 536 546 IPR023828 -
Mtr1g0469 765 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 103 IPR037045 -
Mtr1g0469 765 Gene3D - 623 764 - -
Mtr1g0469 765 Pfam Fibronectin type-III domain 653 761 IPR041469 -
Mtr1g0469 765 Pfam Peptidase inhibitor I9 28 103 IPR010259 -
Mtr1g0469 765 SUPERFAMILY PA domain 355 429 IPR046450 -
Mtr1g0469 765 Pfam Subtilase family 127 582 IPR000209 GO:0006508|GO:0008236
Mtr1g0469 765 CDD Peptidases_S8_3 100 572 IPR034197 -
Mtr1g0469 765 SUPERFAMILY Subtilisin-like 102 610 IPR036852 GO:0004252|GO:0006508
Mtr1g0469 765 Gene3D Peptidase S8/S53 domain 129 619 IPR036852 GO:0004252|GO:0006508
Mtr1g0469 765 ProSiteProfiles Serine proteases, subtilase domain profile. 99 606 - -
Mtr1g0469 765 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 18 763 - -
Mtr1g0469 765 Gene3D - 334 475 - -
Mtr1g0469 765 Pfam PA domain 366 449 IPR003137 -
Mtr1g0469 765 PRINTS Subtilisin serine protease family (S8) signature 126 145 IPR015500 -
Mtr1g0469 765 PRINTS Subtilisin serine protease family (S8) signature 204 217 IPR015500 -
Mtr1g0469 765 PRINTS Subtilisin serine protease family (S8) signature 535 551 IPR015500 -
Mtr1g0469 765 CDD PA_subtilisin_like 340 467 - -
Mtr1g0469 765 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 18 763 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0469 Mtr-Chr1 5431226 5434208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0469 10 765 Subtilisin-like Serine Gene Family AT5G67360 61.346 0.0 969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0469 1 5431226 5434208 Mtr1g0469 1 5431226 5434208 ECH
Mtr1g0469 1 5431226 5434208 Mtr3g3702 3 50820951 50823889 PCT