Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0468 ATGGAGCTTAAAACCTTTATGGATCTTTACCTCACTGCAATTATAACACTTCTTGTTTCTTACATCGTTGCAAAACTTGTTTCCTTAGCAACCACCGACACTCAAACAACTACCAAACATCATGTCCACCACCAACCAGTCGGTCCGGTTCTTCAACAATTCACGGTTCAAACATCTCAAACTGAAAGCCGAGTCGGTTTTATTAAACCGGTTCAAGTGTCAACAGCAACAAATATAGAAACAGAACATAACACAACTGATGCTACGGTTGTTTCCAGTTCCAACGTCGCCGCCGAGTCGCCACCGACAAACTCAGACGTAGCTGTAGCAGATGCTGAGGTTGAATACGGTTCCAATTTTGTTGAGGAAACTGTTACAAAAGGTGATGATTCTGTGCAACAGAGGAACGAGGAGTGTGTGGAAGAAATCATGGAAGAAAGCTTAACGGAGAAGGAAGATGAGGAGAAGAGTGATGAAGAATGGGAATGGGAAGGGATAGAGAGAAGTGAGGTGGAGAAGATGTTTATGACGGCTACAGAATATGTTGGTGAGAAAGGGTATATTGGTAATTGTGATGGTGATTTGGAGATGGAGTTGTATGGACTTCATAAGGTTGCTATGGAAGGACCTTGTTGTGAATCTCAACCAATGCCGCTTAAACTCGCCGCACGTGCGAAATGGAATGCTTGGCAAAAGCTGGGGAACATGAGTCCAGAGGTTGCTATGGAGCGATATATCAGCCTTCTTTCAGATAAAGTTCCGGGATGGATGAAAGATACTTCTGCTGGAATGACTGAAGCTGAACCCATAGGATCGGAAGTTTCTGAGTCTGCTGCTCCTGATTTGAGCTCAGCTTTGTCTCGTCAACCAATTATCTTAACTGAAAGGGAACTTGTTCAAGAGTCTAGTGCCCAGGAGCCTATCCCACATACAGAGTCAGATTTGGAGAACAATGTTAAGAAATGA 966 0.4369 MELKTFMDLYLTAIITLLVSYIVAKLVSLATTDTQTTTKHHVHHQPVGPVLQQFTVQTSQTESRVGFIKPVQVSTATNIETEHNTTDATVVSSSNVAAESPPTNSDVAVADAEVEYGSNFVEETVTKGDDSVQQRNEECVEEIMEESLTEKEDEEKSDEEWEWEGIERSEVEKMFMTATEYVGEKGYIGNCDGDLEMELYGLHKVAMEGPCCESQPMPLKLAARAKWNAWQKLGNMSPEVAMERYISLLSDKVPGWMKDTSAGMTEAEPIGSEVSESAAPDLSSALSRQPIILTERELVQESSAQEPIPHTESDLENNVKK* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0468 321 MobiDBLite consensus disorder prediction 298 312 - -
Mtr1g0468 321 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 171 258 IPR000582 GO:0000062
Mtr1g0468 321 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 3 48 291 - -
Mtr1g0468 321 MobiDBLite consensus disorder prediction 298 321 - -
Mtr1g0468 321 PANTHER ACYL-COA-BINDING PROTEIN, ACBP 48 291 - -
Mtr1g0468 321 Pfam Acyl CoA binding protein 173 249 IPR000582 GO:0000062
Mtr1g0468 321 SUPERFAMILY Acyl-CoA binding protein 171 257 IPR035984 GO:0000062
Mtr1g0468 321 Gene3D - 166 271 IPR014352 -
Mtr1g0468 321 MobiDBLite consensus disorder prediction 260 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0468 Mtr-Chr1 5418094 5422202 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0468 91 258 Acyl Lipid Metabolism Gene Families AT4G24230 46.023 4.01e-36 132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0468 1 5418094 5422202 Mtr1g0468 1 5418094 5422202 ECH