Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0453 ATGTTGTGCGCTTGTTCTGGAGAGCAACACAAATTTGAAGAGGCACCACAGTCACCGGATTCCCTAGCAACAAGGGATTTCTCTGCTAGTGGGTTATCTTCAAGGACGGGAGATTGGGATTCAAAACTAAATGAAAATCAAGTTGAAGATGCTGAATCTTCTCTAAAAGAAGCCGCCTCATTAAACTATGAGGAAGCTAGAGCATTGTTGGGGAGGCTTGAATATCAAAGAGGGAACTTTGAAGCTGCCCTACACGTGCTTCAGGGTATTGACATCAGTACTTTGACCCCAAGGATGATCAGGGCTATTGCTGAAAGAAACAAGCTAAGGAAACCTCGGTCCAAAGCGGGTACTGTGCTTCCTAATTTGATGTCAATGCATTCAGTGAGCCTGCTTCTTGAGGCAATTTTGCTTAAAGCCAAATCCTTAGAGGAGATGAAGCAATACACTGAGGCTGCAAAGGAGTGCAGAATAATTGTGGATACAATTGAATCAGCTCTTCCTAATGGAATGCCGGACGGTATTGGTGAAGAATGTAAGTTGCAGGAAATGTTCCACAAAGCATTGGAGTTGCTTCCAAATCTATGGATCAAGGCAGGTTTTCTAGATGAAGCTGTCACTGCTTATCGGCGTGCTCTGGTCAAACCATGGAATTTGGAGCCAAGGAGGTTGGCCTGTTTACAAAAGGATTTAGCTACCACACTACTATACGGTGGTGTTGAAGTAAATCTACCTTCTCATTTGCAAGTGAATGGTTCAACAGCACCGATGAGTAACATTGAAGAAGCCATACTTCTGTTATTAATTCTATCAGGAAAGATGGCACTTCAGGAAATAGATTGGGATGCTGAAATAACTGGTCATCTTACATTTTCGCTTTCAATGACTGGGATGTTTCAATCATTGGCAGAATGTGTAGAGCAGATCCTACCAGGTATCTTTGGTCGAGCTGATAGGTGGTACTTTCTTGCTCTTTGTTACAGTGCAGCAGGACAAAATGAAGCAGCGTTGAACCTTTTGAGGAAAGCTTGTGGTAGTTCTGAATCAGAGCATATGCCTCATTTTCCTTCATATTTGTTTGGTGCAAAACTGTGTTCCCAGTATCCAAATCATGCTCATGAAGGCATCAAATTTTCACAGCAAGTTATTGATCTAGCCAAGCATCAAAATGAGCATTTTTTGGTTCAAGGCCAACAAATTCTCGGTGTTTGTTACGGAGCTGCAGCTAGAACATCTGTAGTGGATTCCGAAAGAGTTCAATTTCAAAGAGAGTCTTTGAACTTTCTAAATGAAGCTGCTCTAACTGGAAACAACGACCTGGAAGTGATGTTTAGCCTTGGACTTGAAAATGCAATTCAGAGGAATCTAGATGCAGCTTATCAAAACATAATGAGGTACTCAGACATGATGGTTGGAAGTTCTACAAGAGGTTGGCAGCTGTTAGCTCTCATAGTATCTGCACAGCAGAGGTTTAAGGACGCAGAAACTATAGTTGAGTTTGGTTTAGATGACACTGGGAGCGTCGATCAGTTAGAGCTACTTCGACTCAAAGCTGTACTTCAAATTGCGCAGCAGCAACCAAAGCAAGCTATTGAGACCTACAGAACCTTGTTAGCAGTAATAAAAGCCAAAAAGGAGATATTGCTTCAAGCTGAGAGCTTTGAGTTTGATCAAGCAAAAATATTCAGGGATGAGGCATTAACGGAACGGAAATTGGAAATGGAAGCATGGCAAGATATGGCAACCATTTATACAGATCTTAATTCCTTTCTTGATGCAAAAGCTTGTGTTGACAAAGCCCAATTGCTAGAATTTTTCTCTCCCAGAAGTTGGCATATTACAGGGATGTTGTTTGAAGCTCAATCATTATACAAGGAAGCGTTTGTTTCGTTCTCAATCTCGTTGTCAATAGAACCTGATTATATTCAAAGTATCAATTCAACTGCGAAGTTGTTGATTAAACTTGGTATGCAATCACTTCCACTAGCAAGAAGCTTTTTAATGAATGCTTTGCGATTGGAACCGGCAAACCATGACGCGTGGTTCAACCTTGGATTGGTTTCAAAAATGGAGGGTTCATTAGAACAAGCTGCAGATTGTTTTCAAGCTGCATATGAGCTGAAGCTTTCAGCTCCAGTTCAACAGTTTGAGTGA 2154 0.4141 MLCACSGEQHKFEEAPQSPDSLATRDFSASGLSSRTGDWDSKLNENQVEDAESSLKEAASLNYEEARALLGRLEYQRGNFEAALHVLQGIDISTLTPRMIRAIAERNKLRKPRSKAGTVLPNLMSMHSVSLLLEAILLKAKSLEEMKQYTEAAKECRIIVDTIESALPNGMPDGIGEECKLQEMFHKALELLPNLWIKAGFLDEAVTAYRRALVKPWNLEPRRLACLQKDLATTLLYGGVEVNLPSHLQVNGSTAPMSNIEEAILLLLILSGKMALQEIDWDAEITGHLTFSLSMTGMFQSLAECVEQILPGIFGRADRWYFLALCYSAAGQNEAALNLLRKACGSSESEHMPHFPSYLFGAKLCSQYPNHAHEGIKFSQQVIDLAKHQNEHFLVQGQQILGVCYGAAARTSVVDSERVQFQRESLNFLNEAALTGNNDLEVMFSLGLENAIQRNLDAAYQNIMRYSDMMVGSSTRGWQLLALIVSAQQRFKDAETIVEFGLDDTGSVDQLELLRLKAVLQIAQQQPKQAIETYRTLLAVIKAKKEILLQAESFEFDQAKIFRDEALTERKLEMEAWQDMATIYTDLNSFLDAKACVDKAQLLEFFSPRSWHITGMLFEAQSLYKEAFVSFSISLSIEPDYIQSINSTAKLLIKLGMQSLPLARSFLMNALRLEPANHDAWFNLGLVSKMEGSLEQAADCFQAAYELKLSAPVQQFE* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0453 717 SUPERFAMILY TPR-like 194 344 IPR011990 GO:0005515
Mtr1g0453 717 PANTHER PROTEIN NPGR1 1 716 - -
Mtr1g0453 717 MobiDBLite consensus disorder prediction 1 42 - -
Mtr1g0453 717 ProSiteProfiles TPR repeat profile. 608 641 IPR019734 GO:0005515
Mtr1g0453 717 SUPERFAMILY TPR-like 512 708 IPR011990 GO:0005515
Mtr1g0453 717 ProSiteProfiles TPR repeat profile. 678 711 IPR019734 GO:0005515
Mtr1g0453 717 SMART tpr_5 574 607 IPR019734 GO:0005515
Mtr1g0453 717 SMART tpr_5 511 544 IPR019734 GO:0005515
Mtr1g0453 717 SMART tpr_5 608 641 IPR019734 GO:0005515
Mtr1g0453 717 SMART tpr_5 317 350 IPR019734 GO:0005515
Mtr1g0453 717 SMART tpr_5 678 711 IPR019734 GO:0005515
Mtr1g0453 717 PANTHER PROTEIN NPG1 1 716 IPR043376 -
Mtr1g0453 717 Gene3D Tetratricopeptide repeat domain 257 543 IPR011990 GO:0005515
Mtr1g0453 717 Gene3D Tetratricopeptide repeat domain 34 239 IPR011990 GO:0005515
Mtr1g0453 717 Gene3D - 544 717 - -
Mtr1g0453 717 MobiDBLite consensus disorder prediction 21 41 - -
Mtr1g0453 717 SUPERFAMILY TPR-like 46 463 IPR011990 GO:0005515
Mtr1g0453 717 Pfam Tetratricopeptide repeat 317 347 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0453 Mtr-Chr1 5215792 5221022 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0453 1 716 Calmodulin-binding Proteins AT1G27460 56.944 0.0 825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0453 1 5215792 5221022 Mtr1g0453 1 5215792 5221022 ECH