Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0714 ATGCAGGAATCTAGAGACCCTGCTATTAGGCTTTTCGGCCAGAAAATTCCGGTTCCTGGTGACGGCGACCTTCATGCCGATGAAGACTATGAATCGCCTGGCTCTATGGAGGTGGATACTCAAGATGGAGGAGATGTTGATGTTTATGTTGATGATGATGGAGAACAGCAGAATTCTGATGAAGATGATGACAAGGATCATTCAGCTGGAAATACTACAGACAAAAAGAAAGATGCTGGTAATTCTCCAAACGCAGAAGAGACTGATAAAAGTCCAGACTCACTGGCTGAGGCTAGTGTGAACCCGAAAACACCTTCCATAGATGAAGAGATTGCAAAATCAAAAGGTGACAACAACTCAGAGAAGGAGAAAAGTGATGGAGCAGCCAACTCGCAGGAGAAAACCCTGAAGAAGCCAGATAAAATACTTCCATGTCCTCGCTGTAATAGCATGGACACCAAATTCTGCTATTACAACAACTACAACATCAACCAGCCTCGTTATTTCTGCAAGGCCTGCCAAAGATACTGGACTGCAGGTGGTACTATGAGGAATGTACCAGTCGGGGCAGGTCGGCGAAAGAACAAGAACTCTTCTTCCCATTATCGCCATATCAGCATCTCAGAGGCCCTTCAAGCTGCTAGAATTGATGCTCCAAGTGGGACTCATCATCATCTTCCTGCGTTGAAGGGAAACGGCAGAGTCCTAAGTTTTGGATTAGATGCACCTATATGTGATTCTATGGCATCTGTCCTGAATCTTGCAGAGAAAAAGGTCCTAAATGGTGTGAGAAACGGCTTTCATAGCAAAGCTGCTGAAAATGGTACTGGTGGTGGTGATGACTGCTCAAGTGCATCTTCCATTACAGTTTCAAATTCTATGGAAGAAAGTGGCAAAAGTGTTTCCCAAGAATCTTTGCTCAGAACTAATGGCTTTTCTCCTCCAATCCCATGTCTTCCTGGGGTTCCCTGGCCTTATCCTTGGAATTCTCCAGTTCCTTCACCTGCTTTATGCCCTCCAGGATTTCCCTTATCATTCTATCCTGCAGCCTTTTGGAACTGTGGTGTGCCAGGAAATTGGAATATGCCCTGGTTTCCCCCACACCCTTCTGCTCAAAACCCAATATCTCCCACCACTACCAGTACTAGTCCTAATTCTCCAACATTAGGGAAACATTCGAGGGACGGTGATGTGATCAGGTCAGCAGACAACTCACAGAAAGAAGAACCATCATCAAAGCCGAGAAATGGGTGTGTTTTGGTTCCTAAAACCTTGAGAATTGATGATCCAAGTGAAGCTGCAAAGAGTTCAATTTGGGCAACTCTAGGAATCAAGAATGAATCAGCCAGTGGAGGGGGCATGTTCAAGGCCTTCCAATCAAAGAAGGATGGGAAGGATCACATCGTTGAAACCTCACCGGTGTTGCGGGCAAACCCTGCAGCCTTATCTAGGTCCCTTAACTTCCATGAGAACTCCTGA 1479 0.4564 MQESRDPAIRLFGQKIPVPGDGDLHADEDYESPGSMEVDTQDGGDVDVYVDDDGEQQNSDEDDDKDHSAGNTTDKKKDAGNSPNAEETDKSPDSLAEASVNPKTPSIDEEIAKSKGDNNSEKEKSDGAANSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRYFCKACQRYWTAGGTMRNVPVGAGRRKNKNSSSHYRHISISEALQAARIDAPSGTHHHLPALKGNGRVLSFGLDAPICDSMASVLNLAEKKVLNGVRNGFHSKAAENGTGGGDDCSSASSITVSNSMEESGKSVSQESLLRTNGFSPPIPCLPGVPWPYPWNSPVPSPALCPPGFPLSFYPAAFWNCGVPGNWNMPWFPPHPSAQNPISPTTTSTSPNSPTLGKHSRDGDVIRSADNSQKEEPSSKPRNGCVLVPKTLRIDDPSEAAKSSIWATLGIKNESASGGGMFKAFQSKKDGKDHIVETSPVLRANPAALSRSLNFHENS 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0714 492 MobiDBLite consensus disorder prediction 108 141 - -
Mibi13g0714 492 Pfam Dof domain, zinc finger 140 197 IPR003851 GO:0003677|GO:0006355
Mibi13g0714 492 MobiDBLite consensus disorder prediction 374 390 - -
Mibi13g0714 492 MobiDBLite consensus disorder prediction 279 305 - -
Mibi13g0714 492 MobiDBLite consensus disorder prediction 1 143 - -
Mibi13g0714 492 MobiDBLite consensus disorder prediction 44 60 - -
Mibi13g0714 492 PANTHER CYCLIC DOF FACTOR 2 1 492 IPR045174 GO:0003700|GO:0006355
Mibi13g0714 492 MobiDBLite consensus disorder prediction 61 84 - -
Mibi13g0714 492 ProSitePatterns Zinc finger Dof-type signature. 145 181 IPR003851 GO:0003677|GO:0006355
Mibi13g0714 492 ProSiteProfiles Zinc finger Dof-type profile. 143 197 IPR003851 GO:0003677|GO:0006355
Mibi13g0714 492 MobiDBLite consensus disorder prediction 371 419 - -
Mibi13g0714 492 MobiDBLite consensus disorder prediction 393 410 - -
Mibi13g0714 492 MobiDBLite consensus disorder prediction 85 101 - -
Mibi13g0714 492 MobiDBLite consensus disorder prediction 271 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0714 Mibi-ChrMibi13 9274342 9276929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0714 1 490 C2C2-Dof Transcription Factor Family AT3G47500 47.937 4.92e-127 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mibi13g0714 zf-Dof 2.6e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0124 09 1691272 1692819 Mibi13g0714 13 9274342 9276929 ECH
Mibi13g0714 13 9274342 9276929 Mibi13g0714 13 9274342 9276929 ECH