Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0602 ATGGGTTTTTCTTCTCTCCACGTCTGCATGGATCCCTCAGATCACTGGCTCCAGGGCACAATTCACGAGGAGTCAGGATTGGATTCATCATCACCATCAGGAGGAGGAGGAGATCCCATGCTTACATGCTCAAGGCCATTGATAGAAAGGAGGCTAAGACCACCACACGATCAAGCCCTAAAGTGCCCAAGATGTGACTCCACACACACCAAGTTCTGCTACTACAACAATTACAGTCTCTCTCAGCCAAGGTACTTCTGCAAAACTTGCAGAAGGTACTGGACCAAAGGTGGCACTCTCAGAAACATCCCTGTCGGTGGTGGTTGCAGAAAGAACAAGAAAGTCTCCACCAAAAAATCCAACAATATTAATAACAATGACACTTCACAACATAATAATAATATTCAAAACCACCAGCCATTACTGCACCCTCCAGGAATAACCACTTCTTATCACCACCTTAACCACAACCCTAAAGACAATCATCATCTTCAACTTTCTTTCCCAGATGCACAGTTTTCTCACATTGGTAACTTACTGGGAAACACTAGTTTCATGCTTGAGAATAACCCTAGGCCTATTGACTTCATGGAAAGTAAGCTGGAAGGGATAATTGGGAGTGCTACTTCTAGGAACAACAACTTCCATTTTCTGGGGAATGGTGATAATGTGGGTATGGGAATTGGGGTTGGAGAGATTAATGGTGGTGGTAGTCATCATCATCACAATGGATTGTTGCCGCCAAATTTTCAGAATCTTTGTTCTCCATCTGGATTTGGGGTTATGTCATCATCTTTTGATGGTAATAACAATAATATGATGGACTCTTCTTCGTCTTGCCAGAGATTGATGATGCTGCCATATGCAAGTGAGGACCCAAATAATGCCACCATTGATGTGAAGCCAAATCCCAAGCTTTTGTCTCTTGAATGGCAGGATCAGGGTTGTTCAGATGCTGGAAAAGATCAGTCTTCCTTTGGTTATCTTAACGGTCTAGGATCATGGACTGGCATGATCAACGGCTATGGCTCATCCACCACAAATCCTCTGGTTTAA 1056 0.4347 MGFSSLHVCMDPSDHWLQGTIHEESGLDSSSPSGGGGDPMLTCSRPLIERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSTKKSNNINNNDTSQHNNNIQNHQPLLHPPGITTSYHHLNHNPKDNHHLQLSFPDAQFSHIGNLLGNTSFMLENNPRPIDFMESKLEGIIGSATSRNNNFHFLGNGDNVGMGIGVGEINGGGSHHHHNGLLPPNFQNLCSPSGFGVMSSSFDGNNNNMMDSSSSCQRLMMLPYASEDPNNATIDVKPNPKLLSLEWQDQGCSDAGKDQSSFGYLNGLGSWTGMINGYGSSTTNPLV 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0602 351 MobiDBLite consensus disorder prediction 110 132 - -
Mibi13g0602 351 Pfam Dof domain, zinc finger 57 114 IPR003851 GO:0003677|GO:0006355
Mibi13g0602 351 ProSiteProfiles Zinc finger Dof-type profile. 60 114 IPR003851 GO:0003677|GO:0006355
Mibi13g0602 351 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 50 231 IPR045174 GO:0003700|GO:0006355
Mibi13g0602 351 MobiDBLite consensus disorder prediction 23 43 - -
Mibi13g0602 351 MobiDBLite consensus disorder prediction 118 132 - -
Mibi13g0602 351 ProSitePatterns Zinc finger Dof-type signature. 62 98 IPR003851 GO:0003677|GO:0006355
Mibi13g0602 351 MobiDBLite consensus disorder prediction 23 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0602 Mibi-ChrMibi13 7835788 7837385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0602 1 351 C2C2-Dof Transcription Factor Family AT5G62940 42.494 1.95e-58 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mibi13g0602 zf-Dof 1.9e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0258 09 3182720 3183798 Mibi13g0602 13 7835788 7837385 PCT