Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1886 ATGCGCACAACGAGGGCAAAACAAGCTACACGCTTTAAGAAGCTTTATTCTCCACTAACTCTAAAAGACTCACATCCCCTCCTTTTGCTTTTTGGTGTTGTTTTGGATTGTTGTAGATCCACAACCAAAAAAGAAAAGAAGATCATAAAGAAGATGATCCAAGAACTGTTGAACGGTTCTGGTCTCATTCCAGGCGAAACCAAATTCTCCACTACTACTTCTTCTCTTCATCATCATCATCATCATCATAATCCATCCCCCGGAGTTTTCTCTTCCCTAATCACCACTCCATCTCACACTTCTCTTCCACCTATTCCTCCTTCATCATCTCACCCTTCCACCACCACCACTTCTGCCGCCGCCACGTCAGCAAACTCCGACAACCAGAATCTGAGGTGTCCAAGGTGTGATTCTTCCAACACAAAGTTCTGTTACTACAACAACTACAACCTCACTCAGCCTCGCCACTTCTGCAAGACATGTCGCCGCTACTGGACCAAAGGCGGCGCCCTCAGGAATGTCCCCATCGGTGGCGGCTGCCGGAAGAACAGGAGTGTCGGCGGCGCCTCCGTGAAGACGAGCATCACTAAGACGAAGACGGCTGCTGCGCCGCCTCCGTCGGAGCTGCTCGGAGCCGGGTTCAGGGACCATGACCCTAACCCCATCCTATGGGGATCACCACAAAGTTCGCACGTGCTAGCTCTGCTTAGAGCTGGCCAAAACCCTAACCCTAACCCTAATCCTAGTCTTCCCATATCTGTGAATAAGGAAGAAGGGAACTTGATGGTGTCTCACTCTGTGACCGAGCCTGTGGTTGGAAATGTGTTAATTCATGGTCGAGCCTTAAACTTAGATTCCTCTTTGGGTAATCAATTTCCCACACTTGGGTTATGCAGTTCTATTTGGAGAGGCAGTAGTAATAGTAATCAAGATGGGTTGTTAGTTGGAGAAGTAGTACATGAGGGTAGTAGCGGAATTCAAGAACTGTACCAGAGGCTGAGATCATCATCATCATCATCAGCTAATTATTGTGGTGACATTAATAGCTCGTCACAGGTGTTAAGGAACATGGCTTCTTCTTCTTTATCATCAGCTAATTTGGGGTCAGCTTCAGTAGTTTCTGGGGATGATCAATTGGGGTACACCTGGAATCCAACTCTTTCCTGGTTTGATCTTTCCACCACCAATGCTAGGCTTTCATCGGTTGTCTGTGTTGCCTATTATGGAAATCTCACCGCCGGCCAGTTAAGAAACTATAGGGAGCGAAGCTGTGACGTTAAGTTATTGATGATATCTAATTCTTGA 1305 0.4705 MRTTRAKQATRFKKLYSPLTLKDSHPLLLLFGVVLDCCRSTTKKEKKIIKKMIQELLNGSGLIPGETKFSTTTSSLHHHHHHHNPSPGVFSSLITTPSHTSLPPIPPSSSHPSTTTTSAAATSANSDNQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNRSVGGASVKTSITKTKTAAAPPPSELLGAGFRDHDPNPILWGSPQSSHVLALLRAGQNPNPNPNPSLPISVNKEEGNLMVSHSVTEPVVGNVLIHGRALNLDSSLGNQFPTLGLCSSIWRGSSNSNQDGLLVGEVVHEGSSGIQELYQRLRSSSSSSANYCGDINSSSQVLRNMASSSLSSANLGSASVVSGDDQLGYTWNPTLSWFDLSTTNARLSSVVCVAYYGNLTAGQLRNYRERSCDVKLLMISNS 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1886 434 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 117 307 IPR045174 GO:0003700|GO:0006355
Mibi12g1886 434 MobiDBLite consensus disorder prediction 68 131 - -
Mibi12g1886 434 MobiDBLite consensus disorder prediction 111 131 - -
Mibi12g1886 434 Pfam Dof domain, zinc finger 129 185 IPR003851 GO:0003677|GO:0006355
Mibi12g1886 434 ProSitePatterns Zinc finger Dof-type signature. 133 169 IPR003851 GO:0003677|GO:0006355
Mibi12g1886 434 ProSiteProfiles Zinc finger Dof-type profile. 131 185 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1886 Mibi-ChrMibi12 35170056 35173331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1886 98 184 C2C2-Dof Transcription Factor Family AT5G65590 64.130 2.71e-34 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mibi12g1886 zf-Dof 9.1e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g1886 12 35170056 35173331 Mibi12g1886 12 35170056 35173331 ECH