Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g1032 ATGGGAATTAAAAAACACATTTCCTGTCTCTTTTATTATTTCGGTGAAAACAACATTTATTCACCTTGGGAGCGACTTGCCAGAAATCAAGGAGAGAGAAGGAGAGAGATTAGATTCCATTTACATCAAACTCCATCTCTAGGTGCTATTACCCAACCTCTTCACTGTAATTCATTCCCTAATGATGATTTCCTGATAATGATAAAGAAATGGACTCCATTTCTTGCATCATTTAAACAAATCCCTCCCAGTCCCACACATCTTCACTCTTTGTTCACCAAGCTTCTCTATCTCTCTGTCTGGACCACGAACAACTTCACCCCTCTCATTTATAATTTATACGAGCGAAGGAAAAGAAAAGAGAGACGTCAAAGGAAAGTGATGGAGCTAACTCAACTCAGTTATCTGGAGGAACTACTAGCTCCAAGAAGAGACACTTGGAGCTCTTTTTCCTCTGGGTTGGGTGATATATTCCCCAACAATGATTGGAGTTTTGATTCTTTTGTGGATAACCCACCTTTAGCTCCTTTGAATTCACCATTACCTTCATTTCCCACTCCACTAGACCCTAGATTTGAGGGTCCATACACTAATGAAGCAGCAGAAGCATACCCATTTGTCGACGGCTTCACATTAACAGAGTTTGCCTCTTCATATGCCAGGAATGAAGATTCTGCACTATTTCCTGCACAAGAAAGCATCCCATCAATGGAGGATGAGGAGTTTGGCTTTCTGGGGAGTGAAAATCAGAGCCTTGAGGAGATTAACACTGTCTGCAAAATTGAGGAACAAGCCACAGAAGTTCCAGTCTATAACATGGGTTTGTGTGGGGAGAAAAAACCCAAGTCCAAGAAGCTTGAAGGGCAGCCCTCCAAGAATCTAATGGCTGAAAGAAGGAGAAGAAAGCGCCTCAATGATCGCCTCTCCATGCTAAGGTCAATAGTTCCCAAGATCAGCAAGATGGACAGGACTTCTATTCTTGGAGACACCATAGATTATATGAAAGAGCTTCTAGAAAGGATCGGTAAGCTGCAGGAAGAAAGAACGGAAGAGGGTATAAATCACATAAACCTCATGGGTAAATCCAAGGAGATGAAGCCAAATGAAGTGATGGTAAGAAATTCACCCAAGTTTGAGGTAGACAAAGGAGACCATGACACAAAAGTCAGCATCTGTTGTAGCACAAGGGCTGGATTGTTGCTATCAACGGTGAACACCCTTGAAGCATTAGGCCTTGAGATTCAACAATGTGTTGTAAGCAGTTTCAATGATTTTTCGCTGCAAGCATCTTGCTCAGAGATATCCGAGCAGAAAACTGGTATTACACCTGAAGAGATAAAGCAAGCACTATTCAGAAATGCCGGTTATGGTGGGAGATGTCTATAG 1386 0.4206 MGIKKHISCLFYYFGENNIYSPWERLARNQGERRREIRFHLHQTPSLGAITQPLHCNSFPNDDFLIMIKKWTPFLASFKQIPPSPTHLHSLFTKLLYLSVWTTNNFTPLIYNLYERRKRKERRQRKVMELTQLSYLEELLAPRRDTWSSFSSGLGDIFPNNDWSFDSFVDNPPLAPLNSPLPSFPTPLDPRFEGPYTNEAAEAYPFVDGFTLTEFASSYARNEDSALFPAQESIPSMEDEEFGFLGSENQSLEEINTVCKIEEQATEVPVYNMGLCGEKKPKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERIGKLQEERTEEGINHINLMGKSKEMKPNEVMVRNSPKFEVDKGDHDTKVSICCSTRAGLLLSTVNTLEALGLEIQQCVVSSFNDFSLQASCSEISEQKTGITPEEIKQALFRNAGYGGRCL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g1032 461 MobiDBLite consensus disorder prediction 280 300 - -
Mibi12g1032 461 SMART finulus 294 343 IPR011598 GO:0046983
Mibi12g1032 461 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 205 455 - -
Mibi12g1032 461 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 291 351 IPR036638 GO:0046983
Mibi12g1032 461 Pfam Helix-loop-helix DNA-binding domain 294 337 IPR011598 GO:0046983
Mibi12g1032 461 Gene3D - 278 338 IPR036638 GO:0046983
Mibi12g1032 461 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 288 337 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g1032 Mibi-ChrMibi12 25246253 25247915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g1032 279 461 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 67.935 1.08e-73 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi12g1032 HLH 1.1e-09 No_clan