Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g0927 ATGCAACGTCACATCACTAAGAATGATCTCACCTCGAAAGAAGACATCGCTTCGCGCTACTCCGTCGACGTGTACCATTTGAAACCCATAAGGCGTCCCAACAATACTAATGGACACGAAGATTACCTTATTAATGTGCCTTGCACTTGCCAAAATACCAAAGACCTTAGTGGGTACTTCTATGAGACAACCTACATAGTGGAGCCTAATGACACATTGCAGAATATTTCAAATGTGGTTTACAGTGATCAAGCTTGGATTCTTGGGAATCATAGCCTTTTGAACATAGGTGAGAATTTAACCATATATCTTCCCTGTGGATGTTCCATGAGTAGTATTGAGTCTCATATTGTTGTGACATATACGGTGCAGCAGGATGAAACGGTCTTCACAATTGCTAGTCTTTTGAATTCAACAGTGGATAATATGAAGCATTTCAATAGGGTTTTGAATTCAGGGACATCTTTTATAGATGTGGGGTGGGTTTTATTTGTTCCTAATGACTTAAATGACGTTAATCCATCGGTTTAA 531 0.3936 MQRHITKNDLTSKEDIASRYSVDVYHLKPIRRPNNTNGHEDYLINVPCTCQNTKDLSGYFYETTYIVEPNDTLQNISNVVYSDQAWILGNHSLLNIGENLTIYLPCGCSMSSIESHIVVTYTVQQDETVFTIASLLNSTVDNMKHFNRVLNSGTSFIDVGWVLFVPNDLNDVNPSV 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g0927 176 Gene3D LysM domain 114 172 IPR036779 -
Mibi12g0927 176 SMART LysM_2 120 166 IPR018392 -
Mibi12g0927 176 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 22 167 IPR044812 GO:0019199|GO:0045087
Mibi12g0927 176 Pfam LysM domain 121 166 IPR018392 -
Mibi12g0927 176 SUPERFAMILY LysM domain 119 166 IPR036779 -
Mibi12g0927 176 CDD LysM 119 165 IPR018392 -
Mibi12g0927 176 ProSiteProfiles LysM domain profile. 119 165 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g0927 Mibi-ChrMibi12 23653193 23653723 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g0927 43 166 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 26.119 4.17e-06 43.9