Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1639 ATGGAAAGGAATATAGAAGGAAGCAATAATAATTCATGCACAAATGATAAAGAAGGAGTAGGGTTAGAGATGATGAAGAAGGCAAGGCCACAAGAACAATTGAATTGTCCAAGGTGCAATTCAACAAACACAAAGTTCTGTTATTACAACAACTATAGCCTCACACAACCCAGATACTTCTGTAAGACTTGCAGAAGGTATTGGACTGAAGGTGGGTCCCTCAGGAATGTCCCTGTTGGAGGTGGTTCCAGAAAGAACAAGAAGCTCTTCACTACTTCTAATAATCCTTCTTCTTCAACAAAGCTTCTTCCTGACTTGAATCCACCAACAACTACAACCACTTCTTCCACCCTTCCTTCTTCTACTTCTTCTCAGAACCCTAAATTGTTAATGCAAGGAGGCCAAGATCTTAATCTGGCTTTTCCTCCTATTATGGAGAACTATGACCATCATCACCATCTTGGGCTTAGTTTTCAAAGCTCTTCTTCTTCATCTTCTTCAACTTCTTCTTCTACTTCTGCTTTGGAGCTTCTAAGAGCAGGCATGGCTTCTAGTAGTTCTAGGGGTTTGAATAATAATAACCCTTTTGTCCATAATCCCATACTGATGATGCCAAACTCAAATAACGCACTTTTCCCTTCTGGGTTTAGTCCCATAATGCATGAGGTTAAGCCAAGTCTTGGATTTTCAGTGGATAATGATCAAGGGCTTAGGAGCAGATATGGTGTTCATCATCAAGAGAATAATAATAATATGAATGGTGATGGAGGCAGGTTACTGTTTCCTTTTGGAGATGTGAAGCAGATTCCAAGAGGAGCTCATCATGAAGTGGAAGGAAATGATAATAAAGAACATGATGGTAATTCATCTTCTGGTGGGTATTGGACTGGAATGATTGGTGAAGGATCTTGGTGA 915 0.4 MERNIEGSNNNSCTNDKEGVGLEMMKKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKLFTTSNNPSSSTKLLPDLNPPTTTTTSSTLPSSTSSQNPKLLMQGGQDLNLAFPPIMENYDHHHHLGLSFQSSSSSSSSTSSSTSALELLRAGMASSSSRGLNNNNPFVHNPILMMPNSNNALFPSGFSPIMHEVKPSLGFSVDNDQGLRSRYGVHHQENNNNMNGDGGRLLFPFGDVKQIPRGAHHEVEGNDNKEHDGNSSSGGYWTGMIGEGSW 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1639 304 MobiDBLite consensus disorder prediction 75 130 - -
Mibi11g1639 304 ProSiteProfiles Zinc finger Dof-type profile. 34 88 IPR003851 GO:0003677|GO:0006355
Mibi11g1639 304 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 24 185 IPR045174 GO:0003700|GO:0006355
Mibi11g1639 304 MobiDBLite consensus disorder prediction 86 130 - -
Mibi11g1639 304 ProSitePatterns Zinc finger Dof-type signature. 36 72 IPR003851 GO:0003677|GO:0006355
Mibi11g1639 304 MobiDBLite consensus disorder prediction 276 304 - -
Mibi11g1639 304 Pfam Dof domain, zinc finger 32 88 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1639 Mibi-ChrMibi11 37151300 37152214 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1639 26 304 C2C2-Dof Transcription Factor Family AT3G61850 47.138 8.56e-63 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mibi11g1639 zf-Dof 2.7e-33 No_clan