Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g1150 ATGTCGGAGCTTAAAGACCCGGCGATTAAGCTTTTTGGGAGGACGATTTCTCTTCCCCTCAATCACCATGCCTCTTCATCTTCCTCCTTCAATGATTTCTCCGATGATCTTATTCCTCCTCCTTCCCCTTCATCTTCTTCTTCTTCTCCACCACGTGAAGAACCTTGCTCTGCAATTCATCACCACCAGGAGTTGTCAAGGAATGAACTCACCACAGTGCAAGATGATGAAGCCTCCAATCATAGCACAGAGGATTTAAAATCTCCCTCAGCATCTTCCAGGACTTTTGAGAATCCTAAGACTCCCTCAGCAGAAAGAGAGACTTCATTACTCAAATCTGCTAAACAAGGAGAGCAAAGTGAGACGAGCAATTCAGAAGAAAAAACCCCAAAAAAACCTGACAAAATACTTCCATGCCCAAGATGCAATAGCATGGACACCAAATTCTGTTATTTTAACAATTATAATGTCAATCAGCCGCGTCATTTCTGTAAGAACTGTCAGAGATACTGGACTGCCGGAGGAACCATGAGAAACGTGCCTGTAGGCGCAGGTCGTCGTAAGAACAAAAACACTTCAGCCTCACAGTATCGCCAAATTATGGTCCCAAAGACCCTTCATATTGCCAAAGAAAACTCTACCAATGGATTGCACAATGCTGTTTTAGGAAGTAGAACAGCTGTTTTGACCTTTGGCTCAGATTCTCCTCTCTGTGATTCCATGGTTTCTGTGTTGAACCTTGCGGAGAACACACAGAATGGTGTTCTAAATTATTTACCGGAGCAAAGTAATTATGTCTCTCATGGTAGAGAAGATAATGGTAATGATCACTCCATTGGAGCTTCTGGTACAGCTTCAACTTCTTCAGAGAGGAAAAACAACACTACTTCACAAGAACCTGTAAATAACATCAGTCATAGTTTCCCCCCTCAATTGCCATGCTTCCCAGGCTCTTCATGGCCTTGTCAATGGAACACAGCTCAGTGGAGTTCTCCTGTCCCTCCTCCCGGATTCTGTCCTCAAGGCTATCCGGCATCATTCTATGCCAATCCTATATATTGGGGTTGTTCTTTACCAGCTTCATGGAACATACCATCCATATCTGCACAATCATCTTCTGTTAGCCAATCAGCCCCTAGCTCTGGCCCTAATTCGCCTTCCTTGGGAAAACACTCGAGGGAAGGAAACATTATCAATCAAGTCAACTCACTGAAAGAAAATCCTAACATGGAGTGTGGCAATTCTGAAAGTAGTGTCTTGATTCCCAAGACTCTACGAGTTGATGATCCCAATGAAGCTGCAAAGAGTTCTATATGGTCAGCATTAGGGATGAAGAATGAGAAGGCCACTTCTCTAAATGGAGGAGGCCTTTTCAAGGCCTTTCCTGCAAAGAAGGATGACAAGAACCATGTGGCTGAACCATCACTGGTATTGCAAGCCAACCCGGCAGCTTTATCGCGATCTCTTACTTTCCATGAGCGGATTTAA 1488 0.4402 MSELKDPAIKLFGRTISLPLNHHASSSSSFNDFSDDLIPPPSPSSSSSSPPREEPCSAIHHHQELSRNELTTVQDDEASNHSTEDLKSPSASSRTFENPKTPSAERETSLLKSAKQGEQSETSNSEEKTPKKPDKILPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNTSASQYRQIMVPKTLHIAKENSTNGLHNAVLGSRTAVLTFGSDSPLCDSMVSVLNLAENTQNGVLNYLPEQSNYVSHGREDNGNDHSIGASGTASTSSERKNNTTSQEPVNNISHSFPPQLPCFPGSSWPCQWNTAQWSSPVPPPGFCPQGYPASFYANPIYWGCSLPASWNIPSISAQSSSVSQSAPSSGPNSPSLGKHSREGNIINQVNSLKENPNMECGNSESSVLIPKTLRVDDPNEAAKSSIWSALGMKNEKATSLNGGGLFKAFPAKKDDKNHVAEPSLVLQANPAALSRSLTFHERI 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g1150 495 ProSitePatterns Zinc finger Dof-type signature. 139 175 IPR003851 GO:0003677|GO:0006355
Mibi10g1150 495 MobiDBLite consensus disorder prediction 84 120 - -
Mibi10g1150 495 MobiDBLite consensus disorder prediction 121 135 - -
Mibi10g1150 495 MobiDBLite consensus disorder prediction 55 71 - -
Mibi10g1150 495 PANTHER CYCLIC DOF FACTOR 2 1 494 IPR045174 GO:0003700|GO:0006355
Mibi10g1150 495 ProSiteProfiles Zinc finger Dof-type profile. 137 191 IPR003851 GO:0003677|GO:0006355
Mibi10g1150 495 Pfam Dof domain, zinc finger 134 191 IPR003851 GO:0003677|GO:0006355
Mibi10g1150 495 MobiDBLite consensus disorder prediction 277 308 - -
Mibi10g1150 495 MobiDBLite consensus disorder prediction 372 394 - -
Mibi10g1150 495 MobiDBLite consensus disorder prediction 265 308 - -
Mibi10g1150 495 MobiDBLite consensus disorder prediction 20 42 - -
Mibi10g1150 495 MobiDBLite consensus disorder prediction 20 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g1150 Mibi-ChrMibi10 30749533 30752393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g1150 4 493 C2C2-Dof Transcription Factor Family AT5G39660 39.406 1.01e-89 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mibi10g1150 zf-Dof 7.9e-32 No_clan