Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0118 ATGATCCAAGAACTGTTGGGTTCTTCTTCTTCTTCTCCTTCAGGTTTCATATCTCCTAGTGGTGGTGATAGGAAAATCTCCATTAACGCTGCTTCTATTCTTGCACCTCCTCTCCTTTCTTCTTCCTCCGCCGCCGCCCCCACCACCACCACCACCACCCCCGGTGGTGGTATCGGTGCTCCTCCGGCCACCGCCACCTCATCAAACTCCGAAAACCTAAGGTGTCCACGGTGTGATTCATCAAACACTAAATTTTGTTACTACAACAACTACAATCTCACCCAGCCTCGCCACTTTTGCAAGACATGTCGCCGGTACTGGACCAAAGGTGGGGCCCTCAGGAACGTCCCCATCGGAGGCGGTTGCCGGAAAAACAAGACCTTAGCCAGCGCGTCATCATCATCAAACTCTGTGTCGGCGAAGACAAGTAGTACCTTGGCTGTGATGGGTAAGATGAAACCGCCGGCGTCAGGACTCGGTGGCGGCTTCGATCATCATCATGAGATCCAGGCAAGCCCGATTTTATGGGGGTCGCCACAAAATTCTCATATTTTAGCTTTGCTAAGAGCTAACCCTAACCCTAGCTCTGGTGCAAACAATATTAATCCCATACCTAATATGGGTATGAGTATGAAGGAAGATGGGAACTTGATGATGAGAGGATCTCACTCACATATGGTTATGAGTGAACAAATAATAGGCTCTAATAATAATGGGATTCTCAATAATAATGTTCCTCCAACCTCAAGCTTTGATCCTTCACTTGGTCTCACTAGTTCTTTCTGGAGAAACAATAATCATCTTGAGAATGGAGGATTTGTATTTGGCGGCGAGCATCACCAAAATAGTGGCATCCAAGAACTCTACCATAGGCTTAGGTCATCATCTTCTTCAGCTAATAACTATTGTGGTGATGACTCATCAACATCCATGTTTCTAGGAAACATGGCTTCTTCTTCTACTTCTTCTTTATCATCATCATCCTCTTCTTCTGTGGCCATTGTGGAGTCAACTCCAGTTAATAATAATGGCGGTAATGGAATTGGATTGGGGTATTGGAATAGTCAACCTCTTTTCTGGTCTGATCTTCCCACTACCAATGGTGCACATCCGTAA 1116 0.4597 MIQELLGSSSSSPSGFISPSGGDRKISINAASILAPPLLSSSSAAAPTTTTTTPGGGIGAPPATATSSNSENLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKTLASASSSSNSVSAKTSSTLAVMGKMKPPASGLGGGFDHHHEIQASPILWGSPQNSHILALLRANPNPSSGANNINPIPNMGMSMKEDGNLMMRGSHSHMVMSEQIIGSNNNGILNNNVPPTSSFDPSLGLTSSFWRNNNHLENGGFVFGGEHHQNSGIQELYHRLRSSSSSANNYCGDDSSTSMFLGNMASSSTSSLSSSSSSSVAIVESTPVNNNGGNGIGLGYWNSQPLFWSDLPTTNGAHP 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0118 371 ProSitePatterns Zinc finger Dof-type signature. 75 111 IPR003851 GO:0003677|GO:0006355
Mibi10g0118 371 MobiDBLite consensus disorder prediction 43 73 - -
Mibi10g0118 371 ProSiteProfiles Zinc finger Dof-type profile. 73 127 IPR003851 GO:0003677|GO:0006355
Mibi10g0118 371 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 66 277 IPR045174 GO:0003700|GO:0006355
Mibi10g0118 371 Pfam Dof domain, zinc finger 72 127 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0118 Mibi-ChrMibi10 1862829 1863944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0118 60 138 C2C2-Dof Transcription Factor Family AT5G65590 65.823 3.85e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mibi10g0118 zf-Dof 1.3e-32 No_clan