Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2373 ATGTCGCATCAGAAGCCCATTTTGCAAAGCTCTTTCCTTTTGTTACTTTTTCAGGTCTTCATCAAAGTTGCTCTCGTGAGCTCCAAATCTACAATCGAGCCTTGCTCAAACTCCGATTCCTGCAATGCCCTCCTCGGCTACACTGTTTACACTGACCTAAAGGTCTCTGAGGTGTCTTCCCTCTTTCAAATCGACCCCATTTCTCTTCTCACCGCCAATGCCATCGACATTTCATACCCTGACGTTGAACACCACATTCTTCCCTCCCAACTCTTCCTTAAAATCCCCATTAACTGTTCATGCGTCGACGGAATTCGTAAATCGGTGTCGACCCATTACAGAACCAGGTCTTCTGACACTCTTTCTTCGATTGCAGACTCTATATATGGAGGTTTGGTGTCTGCTGATCAGCTTAGGGAGGCAAACTCCATTAATGACCCTTCTGTACTGGATGTGGGTCAGAGCCTTGTGGTGCCTCTTCCATGCACTTGCTTCAATGGGACTGATAACTCTTTGCCTGCAATTTATCTGTCGTATGTGGTGCAACCCGTTGACACTTTGGCTGCGATTGCTGCCAGTTATTCCACCACTCTTACTGATTTGATGGATGTTAATGCCTTGGGGAGTACGGCTATCAGTGATGGCGATATTCTTGCTGTTCCTATCCCGGCTTGCGCGTCGAATTTTCCAAATGATTCCGCTGATTATGGTTTGCTTGTCCCCAATGGAAGTTATGCGATTACAGCGGGCCACTGTATGCAGTGTAGTTGTGGACCACAAAATCTAAATTTGTACTGTATGCCTGCTTCTCTGGCCGTTCCTTGTTCTAGCATGCAATGTAAAAACAGCAACCTTATGGTTGGGAATCTTACAGCACAACAAAGTAGTGCCGGCTGCAATGTTACTTCTTGTAGCTATGATGGTTTTGTTAATGGCACAATAGTAACAACGTTATCCACTTCTCTTCAGCCTCGGTGTCCAGGGCCACAGAAATTTCCCCCACTAGTGGCTCCGCCTACAACCGTTACCAAGATTTCAGAATTTGCACCTTCACCATCACCTCAGTCACATCCGGGTGGTCCAATGAACCCCAAATCATCAGTGGTGCCTTCGATCGGGTCAGTTCCTGGATTCACCCCTGCTAATGGGCCAGTCAGTGGCCTGCTATCTGGTGCTTCTGCTGCAAGCTCCTTGATGAATCCTATGCCCTCTTGGACATCTGCACTTGTGTTATTGTTTGTCAAGTTATTGATCTCTGTAGCATAG 1266 0.4684 MSHQKPILQSSFLLLLFQVFIKVALVSSKSTIEPCSNSDSCNALLGYTVYTDLKVSEVSSLFQIDPISLLTANAIDISYPDVEHHILPSQLFLKIPINCSCVDGIRKSVSTHYRTRSSDTLSSIADSIYGGLVSADQLREANSINDPSVLDVGQSLVVPLPCTCFNGTDNSLPAIYLSYVVQPVDTLAAIAASYSTTLTDLMDVNALGSTAISDGDILAVPIPACASNFPNDSADYGLLVPNGSYAITAGHCMQCSCGPQNLNLYCMPASLAVPCSSMQCKNSNLMVGNLTAQQSSAGCNVTSCSYDGFVNGTIVTTLSTSLQPRCPGPQKFPPLVAPPTTVTKISEFAPSPSPQSHPGGPMNPKSSVVPSIGSVPGFTPANGPVSGLLSGASAASSLMNPMPSWTSALVLLFVKLLISVA 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2373 421 ProSiteProfiles LysM domain profile. 111 158 IPR018392 -
Mibi08g2373 421 SUPERFAMILY LysM domain 111 160 IPR036779 -
Mibi08g2373 421 MobiDBLite consensus disorder prediction 348 367 - -
Mibi08g2373 421 Pfam LysM domain 179 221 IPR018392 -
Mibi08g2373 421 Pfam LysM domain 113 159 IPR018392 -
Mibi08g2373 421 Gene3D LysM domain 105 166 IPR036779 -
Mibi08g2373 421 ProSiteProfiles LysM domain profile. 177 220 IPR018392 -
Mibi08g2373 421 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 12 330 - -
Mibi08g2373 421 SUPERFAMILY LysM domain 177 222 IPR036779 -
Mibi08g2373 421 Gene3D LysM domain 167 233 IPR036779 -
Mibi08g2373 421 CDD LysM 111 158 IPR018392 -
Mibi08g2373 421 CDD LysM 178 220 IPR018392 -
Mibi08g2373 421 SMART LysM_2 112 159 IPR018392 -
Mibi08g2373 421 SMART LysM_2 178 221 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2373 Mibi-ChrMibi08 41487910 41490612 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2373 16 421 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 65.301 0.0 540
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2373 08 41487910 41490612 Mibi08g2373 08 41487910 41490612 ECH