Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1630 ATGATGATGTTGGGTGGTTGTGAATTCTCCTCATCATCATCTCCTCTTGCTCCATCTCATCATCATGCCAATCCTAATAATAATCCAAAGCCATTCCCCAGGTGGAAGCCTGACCACGTGGACCCTCCCCCTCCTTGCCCTCGTTGTTCCTCTCCCAACACCAAATTCTGTTACTACAACAACTACAGCCTCTCCCAACCAAGATACTTGTGCAAGTCTTGCCGTCGTTACTGGACCAAAGGCGGTTTCCTCCGTAACGTCCCCGTCCGAGGTGGCACTTCCCGCAAATCTCGCCGTACTAATAGCAATAAGACCCTACACCTCCCTCCAAACCACCGCCCCTCCACCATCCATGGAGAAGGGTCGGAGTGTAATAATGATACGTCCCGGGTCGAGGGGTGTGATATTGACATGGCCGTGGTCTTTGCTAATTACTTGAGCTCCGGCCATGATGACGTGGCTCAGCCGTCGGATCCCACGGCGGTGGAGGGCGGAGGAGAGGGGCCGTCGGAGGTGATGAGTGGGATTGAGTTGGAGTGGGAGGGTTTTTTGGGTGGCGGTGAGGGACAAGTGGTTGAAGATGTTTTCAGCTTATTGTCTGATGCAACGACGTCGTCTTCTTCTTCTGTTATGTGGCAACCACCACCTCTTTTGCAGTTGCAGCAGGATTTGGACATTCATCCATCATTATTTCCTTTCAATTATGATGATGAGGTTTCTCATTTTCCTATTGCCGATTCCTGCAATTGGAGTTCCTCTGATTTCCCTACTTTTCCTCCCTTCTCTTCATCATCATCATCATCAAAGCCTCTTGGTTCATAA 822 0.5024 MMMLGGCEFSSSSSPLAPSHHHANPNNNPKPFPRWKPDHVDPPPPCPRCSSPNTKFCYYNNYSLSQPRYLCKSCRRYWTKGGFLRNVPVRGGTSRKSRRTNSNKTLHLPPNHRPSTIHGEGSECNNDTSRVEGCDIDMAVVFANYLSSGHDDVAQPSDPTAVEGGGEGPSEVMSGIELEWEGFLGGGEGQVVEDVFSLLSDATTSSSSSVMWQPPPLLQLQQDLDIHPSLFPFNYDDEVSHFPIADSCNWSSSDFPTFPPFSSSSSSSKPLGS 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1630 273 MobiDBLite consensus disorder prediction 88 125 - -
Mibi08g1630 273 ProSiteProfiles Zinc finger Dof-type profile. 44 98 IPR003851 GO:0003677|GO:0006355
Mibi08g1630 273 Pfam Dof domain, zinc finger 44 98 IPR003851 GO:0003677|GO:0006355
Mibi08g1630 273 MobiDBLite consensus disorder prediction 93 110 - -
Mibi08g1630 273 MobiDBLite consensus disorder prediction 152 171 - -
Mibi08g1630 273 MobiDBLite consensus disorder prediction 1 38 - -
Mibi08g1630 273 ProSitePatterns Zinc finger Dof-type signature. 46 82 IPR003851 GO:0003677|GO:0006355
Mibi08g1630 273 MobiDBLite consensus disorder prediction 7 26 - -
Mibi08g1630 273 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 31 161 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1630 Mibi-ChrMibi08 32875276 32876097 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1630 34 147 C2C2-Dof Transcription Factor Family AT1G21340 51.695 4.21e-32 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mibi08g1630 zf-Dof 7.8e-29 No_clan