Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1556 ATGGACACAGCTCAGTGGGCACAGGGGAATATTGGAGTGGTTAAACCTATGGAATTAGGTTCATCAAATCCAAAGCCTCCACCTCCTGGTCCTCCTATGTTAGAGAAAAAGGCAAGGCCTCAAAAAGATCAAGCCTTGAACTGTCCAAGGTGCAATTCAACCAACACAAAATTCTGTTACTACAACAACTATAGCCTTTCTCAGCCCAGATACTTTTGTAAGACTTGTCGAAGGTATTGGACTGAAGGTGGCTCTCTAAGGAATGTTCCTGTTGGTGGTGGCTCCAGAAAGAACAAGAGACCTTCTTCTTCTTCTTCTTCATCTAATAATTCTTCTTCAACTTCATCAAAGAGGCTTCCAGAACCTTCTCCTCCTCCCACCAAGATCCACCAAGCTCAAGATCTTAACTTGGCTTATCCAGCACCACCACCATTATCACTCCCCACACAACAACCTGAGATTTCTGGAAATAATTCTAATTCCTCGAGGGGTTTGATGAATTCCTTGATGCCCATGTCGGTTTCATCAGATGGGAGCATGATTTATGAAAGTAATGGTGGGAATAATAATTCAGCTCATCATCATGGTGGGTTTCCTTTGGAGTTCAAGCCTCATCATCATCATCATCAAGGCCTAAATTTTAGCTTTGAGGGTTTTGAGAATAATAGTGGGTTAATTGGAGGTGGTCTCCATCATCATCAAGGAATGCAATTGGGTAATTCAGGTGGTGGTGGTGGAGGTGCAAGGATCTTGTTTCCCATTGAAGATTTGAAGCACGTGCCAAGCACCACCACTAGTCATGAGTTTGATCAGCAAAATAATAGAGCAAGCCATGGAGATCCAAGTGGGTTTTGGAATGGCATGTTAGGTGGAGGAGCATGGTAG 885 0.435 MDTAQWAQGNIGVVKPMELGSSNPKPPPPGPPMLEKKARPQKDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRPSSSSSSSNNSSSTSSKRLPEPSPPPTKIHQAQDLNLAYPAPPPLSLPTQQPEISGNNSNSSRGLMNSLMPMSVSSDGSMIYESNGGNNNSAHHHGGFPLEFKPHHHHHQGLNFSFEGFENNSGLIGGGLHHHQGMQLGNSGGGGGGARILFPIEDLKHVPSTTTSHEFDQQNNRASHGDPSGFWNGMLGGGAW 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1556 294 MobiDBLite consensus disorder prediction 150 172 - -
Mibi08g1556 294 MobiDBLite consensus disorder prediction 263 294 - -
Mibi08g1556 294 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 32 205 IPR045174 GO:0003700|GO:0006355
Mibi08g1556 294 MobiDBLite consensus disorder prediction 1 46 - -
Mibi08g1556 294 MobiDBLite consensus disorder prediction 84 172 - -
Mibi08g1556 294 MobiDBLite consensus disorder prediction 264 280 - -
Mibi08g1556 294 MobiDBLite consensus disorder prediction 97 118 - -
Mibi08g1556 294 ProSitePatterns Zinc finger Dof-type signature. 48 84 IPR003851 GO:0003677|GO:0006355
Mibi08g1556 294 ProSiteProfiles Zinc finger Dof-type profile. 46 100 IPR003851 GO:0003677|GO:0006355
Mibi08g1556 294 Pfam Dof domain, zinc finger 43 100 IPR003851 GO:0003677|GO:0006355
Mibi08g1556 294 MobiDBLite consensus disorder prediction 21 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1556 Mibi-ChrMibi08 31988356 31989947 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1556 1 294 C2C2-Dof Transcription Factor Family AT4G24060 38.905 6.62e-49 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mibi08g1556 zf-Dof 1.5e-33 No_clan