Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1740 ATGAGTGCTCCTGGAGAAATGTCTCACAAGGATCCGGCTATCAAGCTATTTGGCATGAAGATTCCCTTGCCGGGATCTCAGATTCCGGTGACCTCTCCAATGGGTTTTCAGATTCCAGCCAACTCTGCAACCATGGATGCTTGCAGTAGCTTGAAGAAAGCAGAAGTGGAAAGAGTTTGTGCAGAGAAATCAGAGCAACAGGAGAATGCTTCTGATTTAGCGGCAAGTAGAGAAGGGTCCCAAAATAAGCAGCAAGAAAATGAGCCCAAAGCCAATCCCAAGACTATGGAAGATACAGTGGAATCTAGTAGCACAGATCAAGATAAATCATTTAAGAAACCAGACAAGATTCTTCAGTGTCCACGATGCAACAGTTTGGACACAAAGTTTTGTTATTTCAATAACTACAATGTCAATCAGCCTCGACATTTCTGCAAGAACTGCCAAAGGTATTGGACTGCCGGTGGAACAATGAGGAATGTTCCGGTGGGCGCTGGGAGACGAAAGAACAAGCACCTAGCCTCTCAGTTTCGCCACATCATAGTGTCCTCTGATGCAATTTCAACCTCTAGGTTGGAAACCACAGACTCATCTACTCACCAACTTATCTCCTCTCCTGAATCTTCAGCCACTTTCAGGTCTTCAATGGCAATGGATAATAATGGTATTGTGTTGAAATTTGGTCCAGATGCCCCTCCTCTTTGTGAATCCATGGAGACAATGCTTACTATTAGGGACCAGAAAAGGAAAGTTGATGCAGAAAATGGGAAAGAACAATCTCGGTCAGGGTCTCCAGTACCAAATAGTAGTGGTACAGAACTTGTCATGCTAAAGGAGCAGGGTGTTTCTAATCAGCTTAGCCCATCAAATCAAATGCAATGCTACCCTGTTCCTCCATTATTGTTTCCCTGGAACCCAGATTGGAACAATGTTGTTTCTATGACTGGAATTCATCAGTCTTCGGCGCCAATGCAATGGTATCCTACACCATTGGTGGCCATTCCTGGCATGTGCCCACCTGGCATTCCTTTACAATATGCACCACCATCATATTGGTCTGCCGGCGCCGGGACGGTCCCAGTAGGGTCTAATGGCTGCCTTTCGCCATCGTCGTCGACAAGTAATAGCTGCTGCTCAGGCAATGGCTCTCCAACTTTGGGAAAACACTCTAGAGATACAGTCTTGGCAGATGAAGAGAAGTCAGAGAAGTGTGTTCTGGTTCCAAAGACTCTTAGGATTGATGATCCAAATGATGCTTCAAAAAGTCCTATATGGGCTACATTAGGTATAAAGCCTGACAAGGAAGAGTCTGAATCAGAAGGTCGTAGTTCAAAGAAATTGGAAGCTGAAGGAGATGGAAAAGACCGTGTGTTGGGTGTTTCTCAAATTTTAGAAGCTAACCCAGCCGCTATCTCCAGGGCACATGCATTCCAAGAAGGCATACAATGA 1449 0.4513 MSAPGEMSHKDPAIKLFGMKIPLPGSQIPVTSPMGFQIPANSATMDACSSLKKAEVERVCAEKSEQQENASDLAASREGSQNKQQENEPKANPKTMEDTVESSSTDQDKSFKKPDKILQCPRCNSLDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKHLASQFRHIIVSSDAISTSRLETTDSSTHQLISSPESSATFRSSMAMDNNGIVLKFGPDAPPLCESMETMLTIRDQKRKVDAENGKEQSRSGSPVPNSSGTELVMLKEQGVSNQLSPSNQMQCYPVPPLLFPWNPDWNNVVSMTGIHQSSAPMQWYPTPLVAIPGMCPPGIPLQYAPPSYWSAGAGTVPVGSNGCLSPSSSTSNSCCSGNGSPTLGKHSRDTVLADEEKSEKCVLVPKTLRIDDPNDASKSPIWATLGIKPDKEESESEGRSSKKLEAEGDGKDRVLGVSQILEANPAAISRAHAFQEGIQ 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1740 482 PANTHER CYCLIC DOF FACTOR 2 9 479 IPR045174 GO:0003700|GO:0006355
Mibi06g1740 482 MobiDBLite consensus disorder prediction 248 271 - -
Mibi06g1740 482 MobiDBLite consensus disorder prediction 59 113 - -
Mibi06g1740 482 MobiDBLite consensus disorder prediction 372 391 - -
Mibi06g1740 482 MobiDBLite consensus disorder prediction 90 113 - -
Mibi06g1740 482 MobiDBLite consensus disorder prediction 66 89 - -
Mibi06g1740 482 MobiDBLite consensus disorder prediction 432 455 - -
Mibi06g1740 482 ProSitePatterns Zinc finger Dof-type signature. 120 156 IPR003851 GO:0003677|GO:0006355
Mibi06g1740 482 MobiDBLite consensus disorder prediction 372 388 - -
Mibi06g1740 482 ProSiteProfiles Zinc finger Dof-type profile. 118 172 IPR003851 GO:0003677|GO:0006355
Mibi06g1740 482 Pfam Dof domain, zinc finger 115 172 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1740 Mibi-ChrMibi06 37860279 37862729 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1740 11 479 C2C2-Dof Transcription Factor Family AT5G39660 36.862 2.75e-74 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mibi06g1740 zf-Dof 2.7e-32 No_clan