Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1387 ATGTCGGAAGCAAAAGACCCCGCGATCAAGCTCTTCGGGAAGACGATCCCCGTGCCGGAGATTCAGGCCGGAGCTGCGGCTTCTTCTTCTGGGGATATTGTTGATGATGCTGTTGATCACAATCTTGCTTCTCCCACCAATTCATCGCTAGAGTCCAACACGAAGAAGGATGAGGAAGAACAAGAAACAGACAAGGACACTTTGGGAGAGGATCAAAACGAAAACATGGAGGATGGAGCCCCCACCCGATCTACTGAAGAGATCACTGATCCAGATGCAGCCTCAAGGACAGGTGAAGAATGTATTACACCCCGTGCTGAGAAGGATGCTACTACATTGAAGGCTTCAAAATCTGAAGAAGAGCAGAGTGAGACAAGTAATTCACAAGAGAAGACTTTGAAAAAGCCGGACAAAATACTGCCTTGCCCCCGCTGCAATAGCATGGACACCAAGTTCTGCTACTACAATAATTACAATGTCAACCAACCCCGCCACTTCTGCAAGAACTGCCAGAGATACTGGACAGCTGGTGGAACCATGAGGAATGTGCCTGTGGGTGCTGGCCGTCGAAAGAACAAAAATTCTTCCCACTATCGCCAAATAACTGTCGCTGAAGCGCTCCAGACTGCTCGAACAGAAATGCCAAACGGAGTCCATCATCCTGCCTTGAAGCCCAATGGCACGGTCCTTGCTTTTGGGTCTGATGCACCTTTGTGTGAGTCAATGGCATCTGTATTGAACCTTGCTGATAAAAAAATGCAGGACTGCACGAGAAATGGATTTCACAGACCTGAAGAAGTAAGAATTCCTGTTCCCTATCCCAGTGGAGAGAAAGGAGATGATCATTCAAATAAGTCGCATGCGATGTCAACTAACCCGATGAATGATACAAGCATAAAGAGGCAACAAGATCAAGCAACGCAGAACTGTCAAAGTTTCCCGCCTCAAGTTCCTTACTATCCCGGGGCACCTTGGCCTTTCCCATGGAATCCGGTGCAGTGGAGCTCTCCAGTGCCACCACCTGCGTTTTGCCCACCAGGGTTTACCATGCCTTTCTATCCTGCAGCTGCATATTGGGGTTGTACTGTCTCAGGTGCTTGGAACATACCATGGCTACCACAGCCTTCATCACCGAATAGCATGAGCCCTAATTCTGGCCCAAACTCGCCAACCCTGGGTAAACATTCAAGAGAAGAAAACATGCTCAAGATAAATGATTCAGTGGGAGAGGATGAACGTAGTGGTAAAGAAAATGGCAAAGAAAAGAACCTTTGGGTTCCTAAAACTTTGAGGATTGATGACCCGGGTGAAGCAGCGAAAAGTTCTATATGGACAACGCTGGGGATTAAGAATGATAAGTCTGAGTCAGTGCAAGAGGGAGGACTCTTTAGGGCATTCCCATCAAAGGGTGATGGAAAAGATCATTCAGCACGAAACTCAACAGTCTTGCAGGCCAATCCAGCGGCACTGTCTAGGTCACTCAACTTTCATGAGACCTCATAA 1503 0.4777 MSEAKDPAIKLFGKTIPVPEIQAGAAASSSGDIVDDAVDHNLASPTNSSLESNTKKDEEEQETDKDTLGEDQNENMEDGAPTRSTEEITDPDAASRTGEECITPRAEKDATTLKASKSEEEQSETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSSHYRQITVAEALQTARTEMPNGVHHPALKPNGTVLAFGSDAPLCESMASVLNLADKKMQDCTRNGFHRPEEVRIPVPYPSGEKGDDHSNKSHAMSTNPMNDTSIKRQQDQATQNCQSFPPQVPYYPGAPWPFPWNPVQWSSPVPPPAFCPPGFTMPFYPAAAYWGCTVSGAWNIPWLPQPSSPNSMSPNSGPNSPTLGKHSREENMLKINDSVGEDERSGKENGKEKNLWVPKTLRIDDPGEAAKSSIWTTLGIKNDKSESVQEGGLFRAFPSKGDGKDHSARNSTVLQANPAALSRSLNFHETS 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1387 500 MobiDBLite consensus disorder prediction 52 94 - -
Mibi06g1387 500 MobiDBLite consensus disorder prediction 377 395 - -
Mibi06g1387 500 MobiDBLite consensus disorder prediction 450 486 - -
Mibi06g1387 500 MobiDBLite consensus disorder prediction 101 138 - -
Mibi06g1387 500 Pfam Dof domain, zinc finger 137 194 IPR003851 GO:0003677|GO:0006355
Mibi06g1387 500 MobiDBLite consensus disorder prediction 23 139 - -
Mibi06g1387 500 ProSiteProfiles Zinc finger Dof-type profile. 140 194 IPR003851 GO:0003677|GO:0006355
Mibi06g1387 500 MobiDBLite consensus disorder prediction 266 297 - -
Mibi06g1387 500 ProSitePatterns Zinc finger Dof-type signature. 142 178 IPR003851 GO:0003677|GO:0006355
Mibi06g1387 500 MobiDBLite consensus disorder prediction 377 398 - -
Mibi06g1387 500 PANTHER CYCLIC DOF FACTOR 2 1 500 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1387 Mibi-ChrMibi06 34173514 34176461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1387 6 500 C2C2-Dof Transcription Factor Family AT5G39660 44.549 2.62e-118 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mibi06g1387 zf-Dof 3.1e-32 No_clan