Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1102 ATGGCCGAGGTGAAGAAGGGCCAAGGTAATCACGATGAGGGGATAAAGCTATTTGGGGCTACCATCATGTTGCACAGTAGTGGAAGAAAAGTGGATCAGAAGGTGGAGGAGGAGGAGGAGGAGGATCAGAAGACGGCGGCGGAGAAGAGGGCGGAGAAGATAATAGCATGTCCGAGATGTAACAGCATGGACACCAAGTTTTGTTATTTCAACAACTACAACGTTAATCAGCCAAGGCATTTCTGTAAGGGCTGTCAGAGATATTGGACCGCCGGCGGCGCCCTCCGCAATGTCCCCATCGGTGCCGGCCGCAGGAAGGCCAAGCCCCCCTGCCCTGGCCCTGCCGGATTATTCTCTCATGACGAATCTGTCGCCGCCGCCGCCGCCGCCGGTGGTGGTTTCCGGCGTTTTCGGTTGGAGGAGGGGCTGAATATAATGGAAGAGTGGCATGTGGCCATGGCTCAGAGTGGTTTCCGCCACCTCTTGCCCGGCAAACGGCCCAGAAACGCCGTTGCCAGTCAACCTCTTTAA 531 0.5631 MAEVKKGQGNHDEGIKLFGATIMLHSSGRKVDQKVEEEEEEDQKTAAEKRAEKIIACPRCNSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKAKPPCPGPAGLFSHDESVAAAAAAGGGFRRFRLEEGLNIMEEWHVAMAQSGFRHLLPGKRPRNAVASQPL 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1102 176 ProSiteProfiles Zinc finger Dof-type profile. 55 109 IPR003851 GO:0003677|GO:0006355
Mibi06g1102 176 Pfam Dof domain, zinc finger 53 108 IPR003851 GO:0003677|GO:0006355
Mibi06g1102 176 PANTHER CYCLIC DOF FACTOR 2 33 108 IPR045174 GO:0003700|GO:0006355
Mibi06g1102 176 ProSitePatterns Zinc finger Dof-type signature. 57 93 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1102 Mibi-ChrMibi06 30835116 30835646 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1102 12 168 C2C2-Dof Transcription Factor Family AT2G34140 52.976 4.58e-52 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mibi06g1102 zf-Dof 3e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g1102 06 30835116 30835646 Mibi06g1102 06 30835116 30835646 ECH