Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1012 ATGTTTGGTAACTGTGAGAAAATGGTGGTCATCCCCCCAACAAATAACGAATGGCCACAGATTGGTGATCAGAAGAACTCATCCATGGGTTCCGGTGGGAGAACAACAACAACAACAACAACAACGATGGAGAAACCTTCAAGCCAGGATCTTCAGCAACAACAATCTCTCAAGTGCCCTCGTTGTGATTCAACCAACACAAAGTTCTGCTACTACAACAACTACAGCTTATCTCAGCCAAGACACTTCTGCAAATCCTGCAAACGATATTGGACCAGAGGAGGTACTCTGAGAAATGTTCCTGTAGGAGGTGGTTGCAGGAAGAACAAGCGCGTGAGGCGCCAAACGCCTTCTGCTTCAGATCATACACCTTCTAATTCTTCTTCTCCTTCTCCACCTCCTGGTGCAGCTGCTAATATAAACCTTCCTTCTTCTCAACCCCATATGGATAATCATCATGTTAATCCTCTGTTTTATGGGTTACCAGCTGGTAATAATTCTACTAGTTCTGATACGAACAATCTTCCATTTCCAAGGTTCAATTCTGGGTATGATCATCTGGGATTGGGTGGTTTTTCATCTGGGTATGCTTCAAGTGATTCACTTTTCTCGAATTACAATTCCATCCTTGGTAATTCGATGATCTTTGGGAATTCTTCAACTGCCATATCCTCCCTACTTGGCCCTAGTACTAATCTGCAGCAACAGAAGTTCATCATCAATGGAGGTCTGAAGGATGATGTTCTAGGGAGTAACACTTTCCAAGGCTTAGACCCATTAGGAGAGGTGAAGGTAGATGGAGAAAAACCCAACCAGATCATTGAACATGGGAGCTTGTTCGATTACTACTCACCTTATTATTGGAACGATCAAACTAATAATGTTGGTCCTTCTCCTTCAGTCACTTCCATGATCGAGTGA 921 0.4321 MFGNCEKMVVIPPTNNEWPQIGDQKNSSMGSGGRTTTTTTTTMEKPSSQDLQQQQSLKCPRCDSTNTKFCYYNNYSLSQPRHFCKSCKRYWTRGGTLRNVPVGGGCRKNKRVRRQTPSASDHTPSNSSSPSPPPGAAANINLPSSQPHMDNHHVNPLFYGLPAGNNSTSSDTNNLPFPRFNSGYDHLGLGGFSSGYASSDSLFSNYNSILGNSMIFGNSSTAISSLLGPSTNLQQQKFIINGGLKDDVLGSNTFQGLDPLGEVKVDGEKPNQIIEHGSLFDYYSPYYWNDQTNNVGPSPSVTSMIE 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1012 306 Pfam Dof domain, zinc finger 55 111 IPR003851 GO:0003677|GO:0006355
Mibi06g1012 306 MobiDBLite consensus disorder prediction 98 157 - -
Mibi06g1012 306 MobiDBLite consensus disorder prediction 118 151 - -
Mibi06g1012 306 ProSiteProfiles Zinc finger Dof-type profile. 57 111 IPR003851 GO:0003677|GO:0006355
Mibi06g1012 306 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 42 195 IPR045174 GO:0003700|GO:0006355
Mibi06g1012 306 MobiDBLite consensus disorder prediction 17 53 - -
Mibi06g1012 306 ProSitePatterns Zinc finger Dof-type signature. 59 95 IPR003851 GO:0003677|GO:0006355
Mibi06g1012 306 MobiDBLite consensus disorder prediction 13 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1012 Mibi-ChrMibi06 29831234 29832330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1012 1 279 C2C2-Dof Transcription Factor Family AT1G28310 39.344 2.32e-38 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mibi06g1012 zf-Dof 1.8e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g1012 06 29831234 29832330 Mibi06g1012 06 29831234 29832330 ECH
Mibi06g1012 06 29831234 29832330 Mibi06g1012 06 29831234 29832330 PCT