Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g0952 ATGGGTTTAAGTTCTAAGCAGGTTACTAGTAGTGGGATTGATTGGAATCAGACTTTGCTTCAAGATCAGAAGTTGGAGCTTCCAAAGCCTCCATTGATGAGGAAACTTCAACAGAATCAGCAGCAACAGCAACAACAACAAATTCAGTCATCTCAGCAACAATCATCATCATCGGAGCCTTTGAAGTGTCCAAGGTGTGATTCAATCAACACCAAGTTCTGTTACTACAACAACTACAACAAGTCTCAGCCTCGCCATTTCTGCAGAGCTTGCAAGAGGCACTGGACTAAAGGTGGCACCTTGCGCAATGTCCCCGTCGGCGGTGGCCGCAAAAACAAACGCCCCAAGAAATCTTCCGCCCCCATCTCCTCCGCCGCAAGCTCCGGCATGGCAATTCAGAGTTCTCTGCAGGGGCAAAGTAGTAATCTTACCCCTCTGCCTCTATCATCATCATCATCCTCTGCTTCTCTGTTTCAGTCTCTGCTTCATCCTCCACCTCTTCCATCACAACCCTCTTTACTGATTCCTTCTTCTCATCATCATCATCATCATCAGAATCTGATGAACTCATCAGAAAGTAAGGATTTTGGGATTGGGAATTGTACTTTGCCTCTTCTTCCTCATCAAAATCAGAGCTTTATGTTCCCTCCTTTCTCATCAAGCTCCTCCACCTCTTTTGAGACTAACCCATGTTCTGTTTCAACTTCTTTGAGATCTTCAAGTGTTTTCAATAATAATAATAATAACTATGGCCAAGAGTTGAAGGCAATGGAGGGGCCAACCCCAACACAGACTCAGACTCAGCCATGGGAGATACCTTCCACAAGTGTAGTAGCCAATACAGAAATGTCAAACTATTGGACATGGGAGGAATTCGATTCTCTGGTTTCAACTGATCTCAATGTCCCCTGGGATGATTCTGATTTAAAACCCTGA 936 0.4466 MGLSSKQVTSSGIDWNQTLLQDQKLELPKPPLMRKLQQNQQQQQQQQIQSSQQQSSSSEPLKCPRCDSINTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRPKKSSAPISSAASSGMAIQSSLQGQSSNLTPLPLSSSSSSASLFQSLLHPPPLPSQPSLLIPSSHHHHHHQNLMNSSESKDFGIGNCTLPLLPHQNQSFMFPPFSSSSSTSFETNPCSVSTSLRSSSVFNNNNNNYGQELKAMEGPTPTQTQTQPWEIPSTSVVANTEMSNYWTWEEFDSLVSTDLNVPWDDSDLKP 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g0952 311 Pfam Dof domain, zinc finger 60 113 IPR003851 GO:0003677|GO:0006355
Mibi06g0952 311 MobiDBLite consensus disorder prediction 19 62 - -
Mibi06g0952 311 MobiDBLite consensus disorder prediction 118 147 - -
Mibi06g0952 311 Coils Coil 34 54 - -
Mibi06g0952 311 MobiDBLite consensus disorder prediction 99 147 - -
Mibi06g0952 311 MobiDBLite consensus disorder prediction 168 193 - -
Mibi06g0952 311 MobiDBLite consensus disorder prediction 34 62 - -
Mibi06g0952 311 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 39 258 IPR045174 GO:0003700|GO:0006355
Mibi06g0952 311 ProSitePatterns Zinc finger Dof-type signature. 63 99 IPR003851 GO:0003677|GO:0006355
Mibi06g0952 311 ProSiteProfiles Zinc finger Dof-type profile. 61 115 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g0952 Mibi-ChrMibi06 29028627 29029562 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g0952 59 126 C2C2-Dof Transcription Factor Family AT5G60850 72.464 2.45e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mibi06g0952 zf-Dof 1.8e-31 No_clan