Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0215 ATGGAAGGAATACCTAATCCAAACTCAGTGACAAAGCCAGTAATGGTAGAGAAGAAGGCAAGGCCACAAGAACAATTGAACTGTCCAAGGTGCAATTCAACCAACACCAAGTTCTGTTATTACAACAACTATAGCCTCACACAGCCCAGATACTTCTGCAAGACTTGTAGAAGGTACTGGACTGAAGGTGGGTCCCTCAGAAACATCCCTGTAGGAGGAGGTTCTAGAAAGAACAAGAACAAGATCATCACTTCCTCTACTTCCTCTTCTTCTTCATCAACCTCATCATCATCATCCAAAGTTCCTGACCTAAATCCACCATTATTACCAACTCTCTCTGGTTTGAAAGATCCAAGCTTGAACCTCTCTAGAAGCCAGATGATGATGAGCCAAAGTTTCCCAATCAATAGTCCTAAGATGATCCATGGAGGCCAAGATCTTAATCTGGCTTTTCCAAGTTCTTCTCTTTCAGCTCCTAGGGTTTTGAATAGTAATAATAGTATTCCGTATGCTCCTTCATTCATGATGCCAAATAGTCCCTATGGTGGTAACCTTAATTACCCATCTGGCTTCATCCCCATGCAAGAAGAAACTAAGCCTAGCCATCATCATCTGGGATTTTCTGTGGATGGGCTTGGAAATAGATCATATGGATCAGTACAAGAGAACAATGATCATAATGGTGGGAGGATATTGCTTCCTTTTGGAGGAGTCAAGCAGATTCCAGGAGGTGGTGATCATGAAGTTGTGGAACAAAATAATAAAGAACAAGGGAATTCAAGTGGTTTTTGGACTGGAATGATTGGAGAAGGATCATGGTAA 822 0.4173 MEGIPNPNSVTKPVMVEKKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKNKIITSSTSSSSSSTSSSSSKVPDLNPPLLPTLSGLKDPSLNLSRSQMMMSQSFPINSPKMIHGGQDLNLAFPSSSLSAPRVLNSNNSIPYAPSFMMPNSPYGGNLNYPSGFIPMQEETKPSHHHLGFSVDGLGNRSYGSVQENNDHNGGRILLPFGGVKQIPGGGDHEVVEQNNKEQGNSSGFWTGMIGEGSW 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0215 273 ProSitePatterns Zinc finger Dof-type signature. 28 64 IPR003851 GO:0003677|GO:0006355
Mibi04g0215 273 MobiDBLite consensus disorder prediction 78 104 - -
Mibi04g0215 273 MobiDBLite consensus disorder prediction 1 24 - -
Mibi04g0215 273 MobiDBLite consensus disorder prediction 67 116 - -
Mibi04g0215 273 Pfam Dof domain, zinc finger 24 80 IPR003851 GO:0003677|GO:0006355
Mibi04g0215 273 ProSiteProfiles Zinc finger Dof-type profile. 26 80 IPR003851 GO:0003677|GO:0006355
Mibi04g0215 273 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 17 187 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0215 Mibi-ChrMibi04 3894674 3895495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0215 14 273 C2C2-Dof Transcription Factor Family AT3G61850 41.993 2.41e-51 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mibi04g0215 zf-Dof 6.8e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g0215 04 3894674 3895495 Mibi04g0215 04 3894674 3895495 ECH