Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1230 ATGGCTTCTTCTTCTACTACAACCTCAGCTCCCTCTTCTCATCATCAAAGGGTTATGGAAAAACCAAACCAAGAGCTTCTTCAACAGCAACAAGAAGCCCTAAAGTGCCCTCGATGTGACTCATCAAACACAAAATTCTGTTACTACAACAATTACAGCTTGTCTCAGCCAAGACACTTCTGTAAAGCCTGCAAGCGATACTGGACTCGTGGTGGTACCTTAAGGAATGTTCCTGTTGGTGGTGGTTGCAGAAAAAACAAGCGCATCATGAGGCGTCCCAATTCTTCTTCTTCAGCTTCAGAAATTCATAATACTTCTAATTCTACTCCTTCTTCTACAACTACTGTCTCAGCTCTTTCAATTTCAAACCCAACTTCACAATCCCATCATCAGATCGATGTTGTTGCTTCCACCTCCAATCACATCAATCCTTTATTTTATGGCTTGAATCTTCCGTTTCCAAGGTTCAATTCCAGTTCTGGGTTTGATCATTCTCATCTTCAACGACCTCATCAGATGAATAACAATTCCCTTGGAGGAGTAGATTTCACTGATAATATTGTTGGTTACAGAAATGGGTTTTCTTCAAATCATCATCATACACTTCTTTCAGATTATAATAGCTCTTCCATCTTTGGTAATTCTTCTTCTTCTTCAACATTAATGACCACATCAAGTACTGTTCCTCCTCCTCCTCCTACCACCATTATGGCTTCACTGTTAAGCTCTACGAATCTGCAGCAACAAACGTTCATCAAGAATGGTGGAGCTACTAACAATAACAGTACTTTTCAGGATGAAATGGTTGCTTTAAAAGAAGTGAAATCTGTGGTGGTGGAAGATGATGATGATAATAACAGGTTTCTGGGATGGCAAGATAATAACCAGATCGAGCAGCATCAAGCATCTTTATTGTCTGATCCTACTTCGTCACTTTATTGGAACACTGCAGCAACAGCAATGGGTACTAATACTTGGAATGATCAAACCAATATTGGTTCTCATCAGTCACTTCTCTCATCTGATCTACAATAA 1035 0.3971 MASSSTTTSAPSSHHQRVMEKPNQELLQQQQEALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRIMRRPNSSSSASEIHNTSNSTPSSTTTVSALSISNPTSQSHHQIDVVASTSNHINPLFYGLNLPFPRFNSSSGFDHSHLQRPHQMNNNSLGGVDFTDNIVGYRNGFSSNHHHTLLSDYNSSSIFGNSSSSSTLMTTSSTVPPPPPTTIMASLLSSTNLQQQTFIKNGGATNNNSTFQDEMVALKEVKSVVVEDDDDNNRFLGWQDNNQIEQHQASLLSDPTSSLYWNTAATAMGTNTWNDQTNIGSHQSLLSSDLQ 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1230 344 MobiDBLite consensus disorder prediction 92 124 - -
Mibi03g1230 344 ProSiteProfiles Zinc finger Dof-type profile. 34 88 IPR003851 GO:0003677|GO:0006355
Mibi03g1230 344 Pfam Dof domain, zinc finger 32 88 IPR003851 GO:0003677|GO:0006355
Mibi03g1230 344 ProSitePatterns Zinc finger Dof-type signature. 36 72 IPR003851 GO:0003677|GO:0006355
Mibi03g1230 344 MobiDBLite consensus disorder prediction 83 124 - -
Mibi03g1230 344 MobiDBLite consensus disorder prediction 1 20 - -
Mibi03g1230 344 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 20 237 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1230 Mibi-ChrMibi03 28929360 28930394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1230 34 149 C2C2-Dof Transcription Factor Family AT1G28310 61.207 3.26e-36 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mibi03g1230 zf-Dof 1.2e-33 No_clan