Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1173 ATGGAGAGGGTGAAAGTGATTATGGAGAGAGGGTGGAAGCATAACTCGGAGATGTCACCTAATTGTCCTAGGTGTGGCTCTTGCAACACCAAGTTTTGCTATTACAATAACTACAGCTTAACTCAGCCTCGCTACTTTTGCAAAGCCTGCAGGAGGTACTGGACCAAAGGAGGATCCCTTCGCAACGTCCCCGTTGGTGGTGGCTGCCGGAAAGCCCGGCGTCATACCGGAAAGACTTTAAGACTACAACACTCATCATCAGCATTGCCTTCATTACCTGCTCATCACCACCATGCCCATCATCCCTCAACAACTGTTTTTGATCATAATCATACTTCACATATTGATCTTGCACTCATTTATTCCAATTTCCTCAATCAAAACCCAGATTCATCGAGTGATGAGGAGCCACGTCAACACCAGTTCATGAAATCACAAGGTTTTGATCACTGTGTAGAGTATCAAAGTCTATCCGACATAGTTTTTGGTCTTTCTGAAACTTCCACAATAGAATCAGAATCCCATTTCATCAATATGGTTGGCGATCATCATCATCATCATCATCTGGGTGGGTTCTTCAACTCCATGCAGGATCATCATAAGGAAAAAAGAATAAGTGGTAGTGACGATTTTGAGCTGCCACCATTACCAGGTGAAGAGTTAGCCTCACAATATGATGTGATGACGTGGTCCGAATCTCATGATGAGATTATGGTCGTGAATCATTCGCCACTTGGAACTCAACCTCATGTCAATGGTAATTGGGGAACCTTTTACTCAACAAATGTTTCTTTTCCCAGCCTTTGA 807 0.4349 MERVKVIMERGWKHNSEMSPNCPRCGSCNTKFCYYNNYSLTQPRYFCKACRRYWTKGGSLRNVPVGGGCRKARRHTGKTLRLQHSSSALPSLPAHHHHAHHPSTTVFDHNHTSHIDLALIYSNFLNQNPDSSSDEEPRQHQFMKSQGFDHCVEYQSLSDIVFGLSETSTIESESHFINMVGDHHHHHHLGGFFNSMQDHHKEKRISGSDDFELPPLPGEELASQYDVMTWSESHDEIMVVNHSPLGTQPHVNGNWGTFYSTNVSFPSL 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1173 268 Pfam Dof domain, zinc finger 20 74 IPR003851 GO:0003677|GO:0006355
Mibi02g1173 268 ProSitePatterns Zinc finger Dof-type signature. 22 58 IPR003851 GO:0003677|GO:0006355
Mibi02g1173 268 ProSiteProfiles Zinc finger Dof-type profile. 20 74 IPR003851 GO:0003677|GO:0006355
Mibi02g1173 268 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 167 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1173 Mibi-ChrMibi02 11564353 11565159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1173 1 249 C2C2-Dof Transcription Factor Family AT3G52440 41.569 9.94e-47 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mibi02g1173 zf-Dof 1.2e-30 No_clan